microsoft / nextflow-runnerLinks
☆15Updated 2 years ago
Alternatives and similar repositories for nextflow-runner
Users that are interested in nextflow-runner are comparing it to the libraries listed below
Sorting:
- Customer workshop materials☆18Updated 2 years ago
- Nextflow Tower CLI tool☆50Updated 2 weeks ago
- Portable WDL workflows for IDseq production pipelines☆32Updated 3 years ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆34Updated last week
- Params validation plugin for Nextflow pipelines☆48Updated last year
- A web based tool to manage and automate the processing of publicly available datasets.☆40Updated 4 years ago
- A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM (syndip) or other custom datasets☆12Updated this week
- Please consider using/contributing to https://github.com/nf-core/sarek☆40Updated 4 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆40Updated last year
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- UNDER CONSTRUCTION: A pipeline for Genome Wide Association Studies☆26Updated 2 months ago
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.☆17Updated last week
- Variant catalogue pipeline☆25Updated 3 months ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 6 years ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆45Updated last month
- ☆12Updated last year
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated 2 years ago
- Mutation Identification Pipeline. Read the latest documentation:☆45Updated last year
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.