broadinstitute / gnomad-browser
Explore gnomAD datasets on the web
☆81Updated this week
Related projects ⓘ
Alternatives and complementary repositories for gnomad-browser
- Hail helper functions for the gnomAD project and Translational Genomics Group☆89Updated 3 weeks ago
- ☆68Updated 3 weeks ago
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆141Updated 2 weeks ago
- Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:☆85Updated last year
- ☆81Updated 5 years ago
- This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file…☆122Updated 4 years ago
- A modular annotation tool for genomic variants☆115Updated this week
- Finder of Somatic Fusion Genes in RNA-seq data☆142Updated last year
- IGV Web App☆117Updated this week
- Browser for ExAC consortium data☆106Updated 2 years ago
- Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls☆192Updated 3 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK (v3+v4) and related tools☆50Updated 4 years ago
- Software program for checking sample matching for NGS data☆125Updated 5 months ago
- DEPRECATED. This tool has been superseded by https://github.com/griffithlab/pVACtools☆61Updated 5 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆96Updated 2 years ago
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆74Updated 5 months ago
- Somatic copy number analysis using WGS paired end wholegenome sequencing☆69Updated 4 years ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆94Updated 6 months ago
- WashU Epigenome Browser☆68Updated this week
- Scalable gVCF merging and joint variant calling for population sequencing projects☆153Updated 7 months ago
- Open workflow definitions for genomic analysis from MGI at WUSM.☆102Updated 4 months ago
- Workflows for germline short variant discovery with GATK4☆133Updated 3 years ago
- ☆174Updated last year
- Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF☆142Updated 3 weeks ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆70Updated 3 months ago
- Documentation and description of AWS iGenomes S3 resource.☆107Updated 4 years ago
- Extensible specification for representing and uniquely identifying biological sequence variation☆80Updated this week
- Microsatellite instability (MSI) detection for tumor only data.☆94Updated 6 months ago
- Copy number vaiation detection from SNP arrays☆89Updated 6 months ago
- GTEx Visualizations☆64Updated 3 years ago