Simplex space operations for compositional data implemented in Python.
☆13Feb 17, 2022Updated 4 years ago
Alternatives and similar repositories for compoda
Users that are interested in compoda are comparing it to the libraries listed below
Sorting:
- A command-line program for n-dimensional image enhancement and color balancing.☆22Jul 20, 2021Updated 4 years ago
- ☆10May 17, 2022Updated 3 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Oct 30, 2023Updated 2 years ago
- ☆10Mar 24, 2025Updated 11 months ago
- Spotiflow plugin for napari☆15Feb 2, 2026Updated last month
- Repository of the pipeline of computational methods for logical modelling of biological networks that are deregulated in diseases, develo…☆10Oct 6, 2019Updated 6 years ago
- Augmented Sliced Wasserstein Distances☆10Jun 14, 2025Updated 8 months ago
- Manifold Alignment code for Matlab☆11Mar 4, 2016Updated 10 years ago
- High resolution fMRI data analysis in Python, based on AFNI, FreeSurfer, ANTs, and many other tools.☆14Apr 17, 2025Updated 10 months ago
- Python for Psychologists teaching materials☆12Mar 14, 2021Updated 4 years ago
- A Random Matrix Approach to Extreme Learning Machine☆15Feb 23, 2018Updated 8 years ago
- ManifoldNet Paper Implementation for SPD(n)☆11Nov 10, 2021Updated 4 years ago
- A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging format…☆14Updated this week
- Local signatures for 3D shapes with persistent homology☆13Jul 10, 2019Updated 6 years ago
- The main github repository for NLA2015 course☆12Oct 31, 2016Updated 9 years ago
- Single cell pipelines☆16Dec 16, 2024Updated last year
- Course on Deep Learning for imaging using PyTorch☆13Feb 2, 2022Updated 4 years ago
- Snakemake based framework for NGS data analysis and management☆12May 12, 2024Updated last year
- A tutorial for agile development of cloud applications.☆18May 15, 2020Updated 5 years ago
- hybrid computing engine executed by both GPU and multicore to accelerate PH matrix reduction☆13Dec 2, 2019Updated 6 years ago
- Demonstration problems of ATS capability (look here first!)☆14Jan 9, 2026Updated last month
- The 3rd SPWLA ML competition☆17Jan 5, 2024Updated 2 years ago
- Model the burial and thermal history of sedimentary basins and constrain models using low-temperature thermochronology and vitrinite refl…☆13Feb 26, 2026Updated last week
- ☆14Oct 9, 2025Updated 4 months ago
- Code for the paper 'Geodesic Finite Mixture Model'.☆10Aug 25, 2016Updated 9 years ago
- Game of Life Level Up☆11Feb 20, 2018Updated 8 years ago
- Python package for compositional data analysis☆14Dec 1, 2023Updated 2 years ago
- ‘math+econ+code’ lectures on optimal transport and economic applications, January 2021☆13Sep 14, 2021Updated 4 years ago
- ☆15Feb 13, 2026Updated 3 weeks ago
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 3 years ago
- EPTI (Echo Planar Time-resolved Imaging) raw-data processing, image reconstruction and data preprocessing.☆15Jun 1, 2025Updated 9 months ago
- Notebook repository for geophysical machine learning☆13Aug 27, 2025Updated 6 months ago
- A repository with work-in-progress code: Schroedinger Eigenmaps for Manifold Learning☆12Dec 30, 2017Updated 8 years ago
- Methods for estimating intrinsic dimension and methods for generating data on manifolds☆12May 23, 2019Updated 6 years ago
- Material to showcase and test several tools and packages releated to ZEN, CZI image files and python packages related to those topics☆20Feb 25, 2026Updated last week
- Parallel solver for graph Laplacians from large social networks.☆11Jan 5, 2022Updated 4 years ago
- ☆12Oct 3, 2023Updated 2 years ago
- Matlab code for tree-Wasserstein distance in the paper "Tree-Sliced Variants of Wasserstein Distances", NeurIPS, 2019. (Tam Le, Makoto Y…☆11Mar 11, 2020Updated 5 years ago
- PESTools☆13Jan 10, 2017Updated 9 years ago