boyuren158 / DirFactor

Related projects ⓘ

Alternatives and complementary repositories for DirFactor

• joey711 / shiny-phyloseq
  An interactive web application for demonstrating and using phyloseq.
  ☆59Updated 5 years ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆102Updated 3 years ago
• stephenslab / effective-computing
  Effective Computing—Resources for Computational Biologists
  ☆24Updated 4 years ago
• SISBID / Data-Visualization
  Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data
  ☆25Updated 7 years ago
• alyssafrazee / RSkittleBrewer
  for those times you want to make plots with candy-themed color schemes
  ☆57Updated 4 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆68Updated last year
• brendankelly / micropower
  power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
  ☆35Updated 8 years ago
• PennChopMicrobiomeProgram / ZIBR
  Zero-Inflated Beta Random Effect model
  ☆29Updated last year
• stephens999 / ashr
  An R package for adaptive shrinkage
  ☆80Updated 6 months ago
• StoreyLab / popkin
  R package to estimate kinship and FST from SNP data
  ☆19Updated last month
• dcgerard / vicar
  Various Ideas for Confounder Adjustment in Regression
  ☆23Updated last year
• markrobinsonuzh / TreeSummarizedExperiment
  An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
  ☆13Updated 3 years ago
• Gregor-Mendel-Institute / mlmm
  An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations
  ☆16Updated 6 years ago
• csoneson / treeclimbR
  ☆19Updated 2 weeks ago
• csoneson / countsimQC
  countsimQC - Compare characteristic features of count data sets
  ☆27Updated 2 weeks ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated last week
• variani / lme4qtl
  Mixed models @lme4 + custom covariances + parameter constraints
  ☆48Updated 3 years ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆40Updated 6 months ago
• statdivlab / tinyvamp
  ☆19Updated last year
• gjuggler / ggphylo
  Phylogenetic plots for R and ggplot
  ☆27Updated 12 years ago
• vsbuffalo / gplyr
  ☆18Updated 7 years ago
• QuantGen / BGData
  A Suite of Packages for Analysis of Big Genomic Data
  ☆34Updated last year
• lcolladotor / derfinder
  Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
  ☆42Updated 6 months ago
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆14Updated 5 years ago
• reptalex / phylofactor
  ☆26Updated 8 months ago
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆111Updated last year
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆69Updated 3 weeks ago
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆50Updated 6 months ago