Repo for Physalia course Analysis of Single Cell RNA-Seq data
☆33Nov 9, 2019Updated 7 years ago
Alternatives and similar repositories for 2019_scWorkshop
Users that are interested in 2019_scWorkshop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Exercises for training scientists to perform some RNA-seq analyses.☆11Oct 7, 2019Updated 7 years ago
- sharing interactive single cell gene expression visualizations from Seurat☆13May 18, 2023Updated 3 years ago
- ☆16Feb 12, 2026Updated 9 months ago
- ☆10Oct 7, 2024Updated 2 years ago
- scRNA seq analysis using Seurat V3☆13Jun 23, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Codes for our paper "Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming" published by Cell S…☆11Sep 5, 2020Updated 6 years ago
- ☆41Oct 25, 2018Updated 8 years ago
- Workflows for comparative analyses of single-cell RNA sequencing data, migrated to the OSCA book.☆11May 15, 2019Updated 7 years ago
- ☆16Jun 11, 2019Updated 7 years ago
- Know more about Shirley Liu lab at☆13Jan 27, 2026Updated 9 months ago
- ☆15Feb 28, 2022Updated 4 years ago
- ☆17Oct 1, 2024Updated 2 years ago
- R package to quickly obtain count vectors from indexed bam files☆15May 21, 2026Updated 5 months ago
- Build predicted cell-cell interaction networks from single-cell data.☆10Jan 31, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Analysis of single cell RNA-seq data course☆686Apr 11, 2022Updated 4 years ago
- Source files for various species-specific stage ontologies☆14Jun 10, 2026Updated 5 months ago
- ☆13Dec 14, 2023Updated 2 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆28Jan 25, 2022Updated 4 years ago
- An Immunophenotypic and Transcriptomic Human Bone Marrow Atlas☆12Nov 3, 2023Updated 3 years ago
- ☆17Apr 11, 2024Updated 2 years ago
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 5 years ago
- ☆11Nov 21, 2017Updated 8 years ago
- ☆15Oct 19, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆48Jun 12, 2023Updated 3 years ago
- RNA seq analysis using Bioconductor (analysis built on limma, edgeR)☆12Sep 23, 2022Updated 4 years ago
- Explore and share your scRNAseq clustering results☆53Sep 6, 2023Updated 3 years ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Dec 5, 2023Updated 2 years ago
- Code for further development of the mutual nearest neighbours batch correction method, as implemented in the batchelor package.☆22Jan 6, 2020Updated 6 years ago
- Scripts for processing single liver cells RNA-Seq 10X Genomics Data☆28Oct 17, 2018Updated 8 years ago
- miRTrace☆13Jun 14, 2023Updated 3 years ago
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆13Oct 26, 2022Updated 4 years ago
- ☆13Apr 14, 2026Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Se…☆22Updated this week
- ☆75Aug 19, 2023Updated 3 years ago
- ☆18Mar 10, 2026Updated 8 months ago
- Next generation sequencing (NGS/HTS) tools.☆19Jan 25, 2024Updated 2 years ago
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆15Dec 27, 2023Updated 2 years ago
- ☆14May 23, 2016Updated 10 years ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆87Nov 11, 2020Updated 6 years ago
Are these results useful?