A package to perform Random Walk with Restart on different types of networks
☆23May 2, 2023Updated 3 years ago
Alternatives and similar repositories for RandomWalkRestartMH
Users that are interested in RandomWalkRestartMH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Random Walk with Restart on Multiplex and Heterogeneous Biological Networks☆38Mar 4, 2020Updated 6 years ago
- ☆16Jun 9, 2025Updated last year
- An R package for displaying binary trees, aiming to represent multiple layers of information on dendrogram leaves.☆15Feb 18, 2026Updated 3 months ago
- Cytoscape.js API support in JS, Python, and R Jupyter kernels☆10Nov 11, 2017Updated 8 years ago
- Network diffusion algorithms in R.☆21Jun 28, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A lightweight and flexible analysis pipeline☆12May 22, 2026Updated 3 weeks ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Dec 9, 2021Updated 4 years ago
- Small R package with some functions to visualize DGE results downstream of DESeq2☆12Jul 6, 2023Updated 2 years ago
- R package to access DoRothEA's regulons☆156Feb 24, 2024Updated 2 years ago
- A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlight…☆18Jan 12, 2023Updated 3 years ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- Realizing DTINet with python☆27May 11, 2018Updated 8 years ago
- Analysis and visualization of RNA-Seq results☆32May 1, 2026Updated last month
- R package for creating simulated summary statistics and testing MR methods☆12Sep 2, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022☆13Jan 8, 2024Updated 2 years ago
- Examples for use of YANK - getyank.org☆12Sep 20, 2021Updated 4 years ago
- S-LDSC scripts for use on MR server.☆10Sep 23, 2021Updated 4 years ago
- Cross Modality Optimal Transport for multimodal inference☆10Nov 29, 2024Updated last year
- ☆10Jun 21, 2025Updated 11 months ago
- PCaDB - a comprehensive and interactive database for transcriptomes from prostate cancer population cohorts☆10Dec 29, 2021Updated 4 years ago
- MASC: Mixed-effects Association testing for Single Cells☆16Apr 16, 2021Updated 5 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆100Nov 24, 2020Updated 5 years ago
- Tools for manipulating annotated data matrices☆93Oct 13, 2021Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- GESTALT processing pipeline for barcodes captured with single-cell RNA sequencing☆13Jan 26, 2020Updated 6 years ago
- Debug tool to watch objects/expressions while running an R script☆17Jul 25, 2018Updated 7 years ago
- Generate signature matrix from single cell data.☆12Apr 13, 2021Updated 5 years ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10May 29, 2017Updated 9 years ago
- E2E (Easy to Ensemble) is a novel R package designed to provide a comprehensive and flexible framework for ensemble machine learning, spe…☆24Mar 19, 2026Updated 2 months ago
- ☆12May 24, 2022Updated 4 years ago
- R/Shiny package for network-integrated pathway enrichment analysis☆14Dec 2, 2020Updated 5 years ago
- Code and simulations using interaction-LD score regression☆13Jul 2, 2024Updated last year
- A software package for performing and visualising radial multivariable Mendelian randomization analyses☆13May 14, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Mar 24, 2021Updated 5 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆46Jul 23, 2021Updated 4 years ago
- Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.☆87Mar 20, 2025Updated last year
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 4 years ago
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆45Oct 10, 2025Updated 8 months ago
- An R package to calculate Dynamical Network Biomarkers (DNB).☆11Sep 16, 2022Updated 3 years ago
- 1) SimRank (single pair query, parallel all pair computation / dynamic updates) - by Yue Wang (https://github.com/KeithYue) and Yulin Che…☆14Aug 29, 2020Updated 5 years ago