variani / lme4qtl
Mixed models @lme4 + custom covariances + parameter constraints
☆50Updated 4 years ago
Alternatives and similar repositories for lme4qtl:
Users that are interested in lme4qtl are comparing it to the libraries listed below
- Statistical GENetics Input/Output Functions☆17Updated 4 months ago
- An R package for multivariate adaptive shrinkage.☆91Updated 2 months ago
- ☆42Updated 2 weeks ago
- Learn and validate subtypes from multiple traits☆20Updated 3 years ago
- Automate package and project setup for Bioconductor packages☆50Updated last month
- An R package to create forestplots of measures of effects with their confidence intervals.☆57Updated 3 years ago
- A small project to add ggplot2 extensions☆80Updated 3 years ago
- An R package for adaptive shrinkage☆81Updated 8 months ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- A Suite of Packages for Analysis of Big Genomic Data☆34Updated last year
- A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)☆25Updated 11 months ago
- R package to estimate kinship and FST from SNP data☆19Updated 3 months ago
- Effective Computing—Resources for Computational Biologists☆25Updated 4 years ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆102Updated 3 years ago
- Decorate a plot with associated information☆102Updated last week
- A matrix-like wrapper around PLINK .bed files☆18Updated 4 months ago
- A grammar of genomic data transformation☆143Updated last month
- Implementation of the matrixStats API for sparse matrices☆54Updated 7 months ago
- Genome Interval Arithmetic in R☆89Updated this week
- Grid and ggplot2 based visualization for biological data☆111Updated last year
- Venn Diagram by ggplot2, with really easy-to-use API.☆169Updated 4 months ago
- Explore design matrices interactively with R/Shiny☆37Updated 2 weeks ago
- MSigDB gene sets for multiple organisms in a tidy data format☆70Updated last week
- Raster geoms for ggplot2☆218Updated last year
- GridLMM package☆39Updated last year
- Parallel Genomic evaluations in R☆17Updated 3 months ago
- Demonstration of the use of an R package to organize a data analysis project☆21Updated 4 years ago
- Advanced R / Bioconductor training material☆20Updated last year
- An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations☆16Updated 6 years ago
- Heatmaps from Tidy Data☆50Updated last week