jendelman / StageWiseLinks
two-stage analysis of multi-environment trials for genomic selection and GWAS
☆27Updated last month
Alternatives and similar repositories for StageWise
Users that are interested in StageWise are comparing it to the libraries listed below
Sorting:
- lme4 for Genomic Selection☆18Updated 4 years ago
- ☆16Updated 6 years ago
- Perform GWAS using the FarmCPU model.☆24Updated 10 months ago
- ☆17Updated 5 years ago
- A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines☆14Updated 3 years ago
- https://filippob.github.io/introduction_to_gwas/☆21Updated 3 months ago
- ☆35Updated 3 years ago
- ☆26Updated 4 years ago
- Two methods for mapping and visualizing associated data on phylogeny using ggtree☆12Updated 6 years ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆149Updated 2 years ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆30Updated 7 months ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆29Updated 6 years ago
- blupADC:An useful tool for animal and plant breeding☆31Updated 11 months ago
- QTL analysis in diallel populations☆12Updated last year
- ☆31Updated last month
- Added functions for Echidna in R☆11Updated 2 years ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆21Updated 11 months ago
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Updated 3 months ago
- Shiny apps for teaching Population Genetics☆66Updated 2 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆42Updated 3 months ago
- method for modeling continuous and discrete population genetic structure☆36Updated last year
- ☆109Updated 3 weeks ago
- R front-end for TASSEL 5☆31Updated last week
- Module for analysing admixture graphs☆28Updated 7 years ago
- Simulation of Pleiotropic, Linked and Epistatic Phenotypes☆13Updated last month
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated last month
- Using genome-wide markers for polyploid breeding☆11Updated 3 weeks ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated last month
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆14Updated 7 months ago
- ☆14Updated 3 months ago