Alternatives and similar repositories for blupADC

Users that are interested in blupADC are comparing it to the libraries listed below

• filippob / introduction_to_gwas
  https://filippob.github.io/introduction_to_gwas/
  ☆20Updated last month
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆23Updated 8 months ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆26Updated 4 months ago
• popgenome / lettuce2020
  Codes for the lettuce resequencing project in 2020
  ☆31Updated 4 years ago
• YinLiLin / KAML
  Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
  ☆44Updated 4 months ago
• Menggg / BLINK
  BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
  ☆38Updated 5 months ago
• roberta-davidson / ADMIXTURE-smartPCA-PLINK-and-EIGENSOFT
  Scripts and notes on how to analyse ancient DNA genotype data to understand population structure
  ☆36Updated 2 years ago
• whweve / IntAssoPlot
  ☆18Updated last year
• jingwanglab / Populus_genomic_prediction_climate_vulnerability
  ☆41Updated 2 years ago
• rcastelo / atena
  Analysis of transposable elements
  ☆12Updated last month
• YaoLab-Bioinfo / MaizeSNPDB
  A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
  ☆14Updated 2 years ago
• guokai8 / CandiHap
  Build haplotye and generate figures
  ☆18Updated 3 years ago
• PhHermann / LDJump
  R Package to Estimate Variable Recombination Rates using Population Genetic Data
  ☆42Updated 5 years ago
• whussain2 / Analysis-pipeline
  ☆35Updated 3 years ago
• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆18Updated 4 years ago
• GuangchuangYu / plotting_tree_with_data
  Two methods for mapping and visualizing associated data on phylogeny using ggtree
  ☆12Updated 6 years ago
• YongxinLiu / Amplicon2022
  High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis
  ☆15Updated 2 years ago
• KosukeHamazaki / RAINBOWR
  Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)
  ☆24Updated this week
• rojaff / LanGen_pipeline
  Suit of R-scripts to perform landscape genomic analyses
  ☆14Updated 5 years ago
• arthurkorte / MTMM
  ☆11Updated 6 years ago
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆61Updated 10 months ago
• xiaolei-lab / SIMER
  Data Simulation for Life Science and Breeding
  ☆37Updated 2 months ago
• YinLiLin / hibayes
  Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
  ☆50Updated 4 months ago
• hemstrow / snpR
  ☆30Updated this week
• YaoLab-Bioinfo / binQTL
  QTL mapping with binmap data
  ☆18Updated 6 years ago
• melop / killigenomics
  Killifish genomics scripts
  ☆12Updated 4 years ago
• YuLab-SMU / plotting-tree-with-data-using-ggtreeExtra
  ☆25Updated 4 years ago
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆27Updated last week
• mfumagalli / Copenhagen
  Analysis of genotyping and next-generation sequencing data in medical and population genetics
  ☆23Updated 3 years ago
• ISUgenomics / common_analyses
  Repository of common bioinformatics scripts
  ☆39Updated 3 years ago