DeepGS is a R package for predicting phenotypes from genotypes using deep learning techniques.
☆56Dec 3, 2021Updated 4 years ago
Alternatives and similar repositories for DeepGS
Users that are interested in DeepGS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TrGP aims to get knowledge from the source task's learning system to improve the target genomic prediction (GP) task.☆15Dec 12, 2023Updated 2 years ago
- ☆27Jul 28, 2025Updated 9 months ago
- DNNGP: Deep neural network for genomic prediction☆86Jul 30, 2025Updated 9 months ago
- ☆10Feb 18, 2018Updated 8 years ago
- G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…☆18Sep 27, 2017Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Dual-extraction method for phenotypic prediction and functional gene mining of complex traits☆14Oct 30, 2024Updated last year
- ☆114Oct 3, 2025Updated 6 months ago
- Python library to identify Identical By State regions☆23Mar 19, 2023Updated 3 years ago
- Added functions for Echidna in R☆11Apr 14, 2023Updated 3 years ago
- ☆17Dec 20, 2021Updated 4 years ago
- R Package rrBLUP in Python☆26Mar 26, 2024Updated 2 years ago
- ☆11Aug 20, 2019Updated 6 years ago
- Package for multi-environment trial analysis☆39Oct 16, 2024Updated last year
- R front-end for TASSEL 5☆33Apr 1, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Provide tools for collecting environmental data from GIS-based platforms,enabling environmental characterization studies, providing envir…☆33Mar 27, 2025Updated last year
- A tool to implement Genomic Prediction Experiments using Deep Learning☆17Mar 24, 2023Updated 3 years ago
- 2024 BreedWheat Genomic Selection pipeline☆15Jan 3, 2024Updated 2 years ago
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 3 months ago
- Genomic Annotation in Livestock for positional candidate LOci☆13Feb 26, 2021Updated 5 years ago
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆29Apr 12, 2026Updated 2 weeks ago
- R package for fitting high-dimensional multivariate linear mixed effect models☆38Oct 20, 2025Updated 6 months ago
- This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepag…☆14Dec 11, 2023Updated 2 years ago
- DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping☆17Nov 23, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fitting latent factor mixed models☆13Jun 12, 2020Updated 5 years ago
- PDLLMs: A group of tailored DNA large language models (LLMs) for analyzing plant genomes☆53Apr 9, 2026Updated 3 weeks ago
- AlphaImpute2: pedigree- and population-based genotype imputation☆12Apr 1, 2026Updated 3 weeks ago
- Practical Deep Learning for Genomic Prediction: A Keras based guide to implement deep learning☆71Jul 6, 2023Updated 2 years ago
- Shiu Lab code base for Machine Learning implemented in SciKit-Learn☆13Oct 5, 2021Updated 4 years ago
- A deeplearning driving bioinformatic toolkit.☆25Jul 14, 2025Updated 9 months ago
- Perform GWAS using the FarmCPU model.☆25Dec 14, 2024Updated last year
- ☆11Jan 31, 2018Updated 8 years ago
- Parallel Genomic evaluations in R☆16Sep 26, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆29Nov 22, 2020Updated 5 years ago
- ☆22Jul 7, 2022Updated 3 years ago
- iPat allows you to perform GWAS and GS with drags and clicks!☆11Jul 12, 2022Updated 3 years ago
- ☆31Nov 25, 2019Updated 6 years ago
- [IJCAI 2024] An Embarrassingly Simple Approach to Enhance Transformer Performance in Genomic Selection for Crop Breeding☆19Dec 12, 2024Updated last year
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆19Aug 6, 2023Updated 2 years ago
- ☆59Apr 5, 2026Updated 3 weeks ago