cma2015 / DeepGSLinks
DeepGS is a R package for predicting phenotypes from genotypes using deep learning techniques.
☆53Updated 3 years ago
Alternatives and similar repositories for DeepGS
Users that are interested in DeepGS are comparing it to the libraries listed below
Sorting:
- A tool to implement Genomic Prediction Experiments using Deep Learning☆17Updated 2 years ago
- Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction☆46Updated 7 months ago
- ☆17Updated 5 years ago
- Python API for comprehensive GWAS analysis using GEMMA☆102Updated 2 years ago
- ☆83Updated 2 months ago
- HPC based pipelines for variant calling using GATK☆17Updated 5 years ago
- Practical Deep Learning for Genomic Prediction: A Keras based guide to implement deep learning☆69Updated 2 years ago
- MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis☆17Updated last year
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- ☆25Updated 4 months ago
- Evolutionary Transcriptomics with R☆49Updated 2 weeks ago
- Efficient target prediction incorporating accessibility of interaction sites☆49Updated 2 months ago
- ☆36Updated 3 years ago
- ☆35Updated last week
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆21Updated 8 years ago
- an R/Shiny application for interactive creation of Circos plot☆49Updated 2 years ago
- A python package and a set of shell commands to handle GTF files☆50Updated last year
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Issue tracker for the Biostar Handbook☆64Updated 3 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 8 months ago
- Coding-Non-Coding Index (CNCI)☆40Updated 7 years ago
- STITCH - Sequencing To Imputation Through Constructing Haplotypes☆85Updated 3 weeks ago
- A small-RNA sequencing analysis pipeline☆97Updated this week
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆76Updated last month
- Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms☆33Updated 8 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- R package for fitting high-dimensional multivariate linear mixed effect models☆37Updated last month
- tutorial on pggb☆36Updated 10 months ago