mebbert / Dark_and_Camouflaged_genes
☆22Updated last year
Alternatives and similar repositories for Dark_and_Camouflaged_genes:
Users that are interested in Dark_and_Camouflaged_genes are comparing it to the libraries listed below
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 3 years ago
- Population-wide Deletion Calling☆35Updated 5 months ago
- Structural variant (SV) analysis tools☆35Updated 8 months ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆20Updated 3 years ago
- PopSTR - A Population based microsatellite genotyper☆32Updated last year
- Reducing reference bias using multiple population reference genomes☆32Updated 9 months ago
- Evaluation of phasing performance☆22Updated 6 years ago
- ☆23Updated 5 years ago
- Method to optimally select samples for validation and resequencing☆27Updated 3 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆32Updated last year
- ☆39Updated 5 months ago
- Functions to compare a SV call sets against a truth set.☆29Updated 10 months ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data☆15Updated 11 months ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆27Updated 8 months ago
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- Immuological gene typing and annotation for genome assembly☆31Updated 4 months ago
- Haplotype phaser for next-generation sequencing data☆13Updated 3 years ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆25Updated 2 months ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- Location of public benchmarking; primarily final results☆18Updated 2 weeks ago
- Structural variant caller☆54Updated 3 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆34Updated 2 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆47Updated 5 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 6 years ago
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago
- Python package and routines for merging VCF files☆29Updated 3 years ago
- ☆29Updated 2 years ago
- Prioritize structural variants based on CADD scores☆28Updated 4 years ago