macmanes-lab / Gen711Links
☆12Updated 9 years ago
Alternatives and similar repositories for Gen711
Users that are interested in Gen711 are comparing it to the libraries listed below
Sorting:
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 7 years ago
- Public Health England SNP calling pipeline.☆37Updated 7 years ago
- Using kallisto for metagenomic analysis☆49Updated 8 years ago
- Interactive tools for metagenome visualization and binning in R☆27Updated 7 years ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆31Updated 2 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47Updated 3 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- A list of weak Bacterial assemblies in GenBank☆18Updated 8 years ago
- Extract lineage CSVs from NCBI for use with sourmash lca.☆29Updated 2 years ago
- AMPtk: Amplicon ToolKit for NGS data (formally UFITS)☆39Updated 2 years ago
- Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm☆18Updated 11 years ago
- Confirming specific taxonomic groups within your samples.☆19Updated 4 years ago
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Updated 8 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- ☆20Updated 11 years ago
- Components of genome sequence assembly tools☆21Updated 3 years ago
- Merge transcriptome assemblies☆31Updated 9 years ago
- tutorials for 2015 EDAMAME☆24Updated 8 years ago
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Updated 6 years ago
- A talk on Makesfiles in bioinformatics☆26Updated 12 years ago
- De novo estimates of genetic relatedness from next-gen sequencing data☆45Updated 6 years ago
- a re-packaging of the sankey plot function for kraken reports taken from pavian and sankeyD3 from Florian Breitwieser☆14Updated 2 weeks ago
- A set of R scripts for the analysis of microbial profiles☆41Updated last year
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- ☆17Updated 7 years ago
- Tools for extracting individual genomes from metagenomes☆16Updated 2 years ago
- k-SLAM ultra fast alignment and taxonomic classification of metagenomic datasets☆23Updated 7 years ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆27Updated 7 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Updated 3 years ago