macmanes-lab / Gen711Links
☆12Updated 8 years ago
Alternatives and similar repositories for Gen711
Users that are interested in Gen711 are comparing it to the libraries listed below
Sorting:
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- An integrated high performance bioinformatics toolkit☆23Updated 6 years ago
- reference free variant assembly☆33Updated last year
- Ebola virus surveillance☆16Updated 8 years ago
- Fungal Genome Mapping Pipeline☆19Updated 5 years ago
- repo for 2016 EDAMAME tutorials☆11Updated 8 years ago
- blast, shmlast☆22Updated 4 years ago
- Reproducible Phylogenomics☆22Updated 8 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Updated 9 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- Bio::Phylo - Phyloinformatic analysis using Perl☆16Updated 6 years ago
- Extract lineage CSVs from NCBI for use with sourmash lca.☆28Updated last year
- Annotate your metagenome assemblies☆11Updated 6 years ago
- Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree☆16Updated last year
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- A list of weak Bacterial assemblies in GenBank☆18Updated 7 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Workflows I find helpful for fungal genome annotation☆21Updated last year
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆30Updated 9 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 6 years ago
- Interactive tools for metagenome visualization and binning in R☆28Updated 6 years ago
- Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013☆37Updated 11 years ago
- Snakemake-based amplicon processing protocol for 16S and ITS sequences.☆14Updated last year
- Collection of utilities for working with PacBio-based assemblies☆13Updated 2 years ago
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 5 years ago
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago
- Simple tool to verticalize text delimited files.☆36Updated last year
- Metagenomic pipeline and other general scripts used in the lab.☆35Updated 4 months ago
- tutorials for 2015 EDAMAME☆24Updated 7 years ago