macmanes-lab / Gen711
☆12Updated 8 years ago
Alternatives and similar repositories for Gen711:
Users that are interested in Gen711 are comparing it to the libraries listed below
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- An integrated high performance bioinformatics toolkit☆23Updated 6 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- reference free variant assembly☆33Updated last year
- Ebola virus surveillance☆16Updated 8 years ago
- Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013☆37Updated 11 years ago
- Flexible omics pipeline☆18Updated 9 months ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Updated 9 years ago
- Fungal Genome Mapping Pipeline☆19Updated 5 years ago
- Set of tools for viral metagenomics.☆14Updated 2 weeks ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated last year
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago
- ☆18Updated 9 years ago
- Bio::Phylo - Phyloinformatic analysis using Perl☆16Updated 5 years ago
- blast, shmlast☆22Updated 4 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 6 years ago
- Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree☆16Updated 11 months ago
- Bam Read Index - Extract alignments from a bam file by readname☆25Updated last year
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated 2 years ago
- Light version blobtools package - NO LONGER MAINTAINED! DO NOT USE!☆8Updated 9 years ago
- Histosketching Using Little Kmers☆56Updated last year
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Interactive tools for metagenome visualization and binning in R☆28Updated 6 years ago
- Guide to transcriptome assembly & analysis☆21Updated 8 years ago
- repo for 2016 EDAMAME tutorials☆11Updated 8 years ago
- Generate kmers/minimizers/hashes/MinHash signatures, including with multiple kmer sizes.☆24Updated 4 years ago
- Reproducible Phylogenomics☆22Updated 8 years ago
- A talk on Makesfiles in bioinformatics☆26Updated 11 years ago