vsbuffalo / makefiles-in-bioinfoLinks
A talk on Makesfiles in bioinformatics
☆26Updated 12 years ago
Alternatives and similar repositories for makefiles-in-bioinfo
Users that are interested in makefiles-in-bioinfo are comparing it to the libraries listed below
Sorting:
- ☆18Updated 10 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Ebola virus surveillance☆15Updated 9 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Response to blog post about Salmon☆37Updated 8 years ago
- ClusterScan, search for clusters of features in a given annotation.☆11Updated 4 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Genomic plot in trellis layout☆41Updated last year
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Population-based detection of structural variation from High-Throughput Sequencing.☆33Updated 3 years ago
- Allele frequency filter app☆14Updated 3 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 7 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 7 years ago
- Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach☆36Updated 14 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 7 years ago
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 6 years ago
- The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.☆32Updated 2 years ago
- Talk to the NCBI EUtils☆22Updated 5 years ago
- Using kallisto for metagenomic analysis☆49Updated 8 years ago
- ☆18Updated 8 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated 2 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Updated 3 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 5 months ago
- Exploration of controlled loss of quality values for compressing CRAM files☆36Updated 2 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Simple tool to verticalize text delimited files.☆37Updated last year
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- ☆29Updated 6 years ago