vsbuffalo / makefiles-in-bioinfoLinks
A talk on Makesfiles in bioinformatics
☆26Updated 11 years ago
Alternatives and similar repositories for makefiles-in-bioinfo
Users that are interested in makefiles-in-bioinfo are comparing it to the libraries listed below
Sorting:
- ☆18Updated 9 years ago
- Ebola virus surveillance☆16Updated 8 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Talk to the NCBI EUtils☆22Updated 4 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- ClusterScan, search for clusters of features in a given annotation.☆11Updated 3 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Response to blog post about Salmon☆37Updated 7 years ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆28Updated last week
- Population-based detection of structural variation from High-Throughput Sequencing.☆31Updated 2 years ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆31Updated last year
- De novo estimates of genetic relatedness from next-gen sequencing data☆45Updated 5 years ago
- Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013☆37Updated 11 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆52Updated 7 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Merge transcriptome assemblies☆31Updated 8 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.☆32Updated 2 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated last year
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 6 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- ☆43Updated 9 years ago
- sort genomic data☆35Updated 5 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆23Updated 4 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- Pipelines to do MinION sequencing of Zika virus☆15Updated 5 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆35Updated 2 years ago
- Handy tools for Microbiome analysis in R☆18Updated 6 years ago