machiela-lab / PCAmatchRLinks
A flexible R package for weighted principal component case control matching
☆9Updated last year
Alternatives and similar repositories for PCAmatchR
Users that are interested in PCAmatchR are comparing it to the libraries listed below
Sorting:
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 8 months ago
- Pan-transcriptomic phenotyping☆18Updated 3 weeks ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- GENome Organisation Visual Analytics☆16Updated 3 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated 3 weeks ago
- ☆17Updated last year
- Peak calling for 4C data☆12Updated 7 years ago
- ☆23Updated 4 years ago
- A collection of modules to process and analyze IMGT-HLA sequences.☆29Updated 2 years ago
- ☆30Updated 8 months ago
- An R for fast and flexible DNA methylation analysis☆32Updated last month
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- HOT regions paper☆11Updated 6 years ago
- PCA for hidden variable inference in QTL mapping: an R package and tutorial☆16Updated 2 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 5 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- iread☆25Updated 4 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 5 years ago
- Workflow for Sequenza, cellularity and ploidy☆20Updated last week
- ☆15Updated 2 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 9 months ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 4 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆13Updated 5 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Updated 9 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- a set of NGS pipelines☆24Updated this week