machiela-lab / PCAmatchRLinks
A flexible R package for weighted principal component case control matching
☆9Updated last year
Alternatives and similar repositories for PCAmatchR
Users that are interested in PCAmatchR are comparing it to the libraries listed below
Sorting:
- Pan-transcriptomic phenotyping☆18Updated this week
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆38Updated 6 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- ☆29Updated 11 months ago
- GENome Organisation Visual Analytics☆15Updated 3 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 7 months ago
- R package that allows easily performing a complete Hi-C data analysis through a Graphical User Interface☆16Updated 4 years ago
- ☆10Updated last month
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆45Updated 3 months ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Updated 3 years ago
- Make rapid visualizations of RNA-seq data in R☆19Updated 5 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- ☆9Updated 4 years ago
- Interactive eQTL visualizations☆13Updated 2 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- ☆9Updated 5 years ago
- ☆17Updated 11 months ago
- ☆15Updated 2 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated last week
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- A segmentation approach to analyze DNA methylation patterns and identify differentially methylation regions from whole-genome datasets☆19Updated 6 months ago
- ☆18Updated 4 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Bioinformatics Pipeline☆13Updated 2 years ago