kaustubhad / fastman
An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.
☆36Updated 5 months ago
Related projects ⓘ
Alternatives and complementary repositories for fastman
- R package to perform Bayesian Genome-Wide Association Studies☆38Updated last year
- Manhattan++☆26Updated 8 months ago
- Statistical tools for Quantitative Genetic Analyses☆34Updated this week
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated 9 months ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆15Updated 9 months ago
- ☆16Updated 3 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆21Updated 3 months ago
- ☆30Updated 3 years ago
- QTL Discovery using Annotations☆23Updated last year
- Sequence kernel association test (SKAT)☆42Updated 11 months ago
- Colocalization analysis of genetic association signals☆47Updated this week
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆19Updated 7 years ago
- ☆32Updated last year
- A flexible R package for weighted principal component case control matching☆10Updated 7 months ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆33Updated 6 years ago
- Scripts for implementing the Tractor pipeline☆45Updated 2 months ago
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆10Updated 8 years ago
- Cross-population fine-mapping☆26Updated last week
- A collection of various utilities for GWAS summary statistics☆26Updated 5 months ago
- Genetics ToolboX R package☆30Updated 4 years ago
- ☆18Updated 6 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆48Updated 5 years ago
- R package for testing and visualizing gene list overlaps☆18Updated 8 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Generalized linear Mixed Model Association Tests☆36Updated 11 months ago
- Enhanced version of the FastQTL QTL mapper☆56Updated last year
- Make LocusZoom-like plots with your own LD matrix.☆37Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- ☆19Updated last month
- Flexible Bayesian inference of mutational signatures☆33Updated last year