wangshenguiuc / set2gaussianLinks
code repo for Set2Gaussian
☆15Updated 5 years ago
Alternatives and similar repositories for set2gaussian
Users that are interested in set2gaussian are comparing it to the libraries listed below
Sorting:
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆50Updated 3 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 8 months ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆21Updated 11 months ago
- ☆14Updated 8 years ago
- ☆23Updated 2 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Biological Network Integration using Convolutions☆62Updated last year
- ☆18Updated 2 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- Code accompanying the paper "Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively…☆12Updated 3 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 8 years ago
- ☆14Updated 2 years ago
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆40Updated last year
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆12Updated 2 years ago
- ☆18Updated last year
- mRNN is an implementation of a Gated Recurrent Unit (GRU) network for classification of transcripts as either coding or noncoding.☆21Updated 6 years ago
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 2 years ago
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆56Updated 4 years ago
- Deep Generative Modeling of RNA Velocity☆36Updated last month
- repository containing analysis scripts and auxiliary files☆34Updated 5 years ago
- ☆27Updated 2 years ago
- Single cell typing based on cell ontology☆52Updated last year
- ☆21Updated 2 years ago
- CpG Transformer for imputation of single-cell methylomes☆38Updated last year
- Predicting gene expression levels from genomic sequences☆53Updated 5 years ago
- MHC-peptide class II interaction prediction, binding, presentation☆22Updated 3 years ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆24Updated 6 years ago
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆36Updated last year
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…☆18Updated 4 years ago
- CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offer…☆54Updated last year