XinmingTu / Awesome-Bio-ML-PKULinks
This is a repo that includes some resources about machine learning and the application in biology. We are students/alumni of Peking University.
☆15Updated 5 years ago
Alternatives and similar repositories for Awesome-Bio-ML-PKU
Users that are interested in Awesome-Bio-ML-PKU are comparing it to the libraries listed below
Sorting:
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆12Updated 2 years ago
- ☆51Updated 2 years ago
- ☆35Updated 2 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- A VGAE-based model to infer transcription factor regulatory network☆27Updated 3 years ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, hypergraph☆86Updated 10 months ago
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- Scripts for building computational models of gene regulation with tensorflow☆10Updated 5 years ago
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆64Updated 2 years ago
- DeepTACT: predicting three-dimensional chromatin contacts via bootstrapping deep learning☆20Updated 5 years ago
- Predicting gene expression levels from genomic sequences☆53Updated 5 years ago
- DeepG4: A deep learning approach to predict active G-quadruplexes☆12Updated 3 years ago
- ☆18Updated 3 years ago
- Code for reproducing the Sei manuscript results☆17Updated 3 years ago
- model-based understanding of single-cell CRISPR screening☆24Updated 7 months ago
- ☆17Updated 9 months ago
- A machine-learning algorithm to predict CTCF-mediated long-range chromatin interactions☆17Updated 6 years ago
- ☆22Updated 5 months ago
- Must-read papers on deep learning based methodology paper for single cell data analysis☆18Updated 4 years ago
- ☆18Updated last year
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆83Updated 3 years ago
- ☆67Updated 2 months ago
- Code related to the Celligner manuscript☆46Updated 4 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆25Updated 2 years ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆24Updated last year
- HLA-II ligand predictor.☆44Updated 2 years ago
- ☆60Updated last week
- CNN architecture for predicting DNA binding sites for Transcription Factors☆52Updated 6 years ago
- ☆18Updated 2 years ago
- C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.☆77Updated last year