This is the official codebase for methylGPT : a foundation model for the DNA methylome.
☆67Mar 5, 2026Updated 7 months ago
Alternatives and similar repositories for MethylGPT
Users that are interested in MethylGPT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CpGPT: a Foundation Model for DNA Methylation.☆84Sep 5, 2026Updated last month
- 太医院 — Agentic Longevity OS with 10 AI physicians. N-of-1 trials, cross-module pattern detection, PubMed-grounded insights, Bayesian causa…☆25Mar 12, 2026Updated 7 months ago
- Machine learning tools for biomarker analysis☆93Jul 11, 2026Updated 3 months ago
- A segmentation approach to analyze DNA methylation patterns and identify differentially methylation regions from whole-genome datasets☆22Sep 3, 2026Updated last month
- A Python-based compendium of GPU-optimized aging clocks.☆132Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆42May 27, 2025Updated last year
- A personal AI operating system built on OpenClaw/Claude Code, MCP servers, and structured markdown. Feedback RL, voice cloning, Screenpip…☆24Apr 24, 2026Updated 6 months ago
- Important papers relating to the biology of cell free DNA☆19Sep 21, 2018Updated 8 years ago
- Predict 5mC in PacBio HiFi reads☆12Nov 2, 2022Updated 3 years ago
- Fragment End Integrated Analysis tool☆10Apr 23, 2024Updated 2 years ago
- ☆17Jan 7, 2025Updated last year
- A lightweight genomic language model built from scratch, employing a BPE tokenizer and a RoBERTa architecture.☆14Jul 23, 2025Updated last year
- Joint Protein-Ligand Embedding☆11Oct 3, 2025Updated last year
- Preprocessing file generator (v1) and hosted Boltz-2 API builder/submitter (v2.0): binary, ternary, or N-body protein-ligand-DNA-RNA bind…☆12Oct 22, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Dec 4, 2023Updated 2 years ago
- Runs and compares different methylation based cell type deconvolution algorithms☆12Jul 30, 2025Updated last year
- The code for JEPA-DNA implements a genomic foundation model that combines generative pretraining with a joint-embedding predictive object…☆35Jul 22, 2026Updated 3 months ago
- This repository houses scripts for training genetic scores of omic traits in INTERVAL☆30May 31, 2023Updated 3 years ago
- ☆11Mar 27, 2026Updated 7 months ago
- A library for full-stack aging clocks design and benchmarking.☆38Jan 29, 2025Updated last year
- ☆15Jan 27, 2025Updated last year
- Scripts for analyses in the Griffin manuscript☆13Dec 14, 2022Updated 3 years ago
- Cross-modality matching and prediction with labeled Gromov-Wasserstein Optimal Transport.☆23Oct 10, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- RNAGenesis: A Generalist Foundation Model for Functional RNA Therapeutics☆37Oct 1, 2026Updated 3 weeks ago
- ☆32Oct 3, 2023Updated 3 years ago
- Code for reproducing paper describing methods for representing peptides☆18Sep 11, 2026Updated last month
- ParetoDrug☆12Sep 3, 2024Updated 2 years ago
- ☆31Dec 15, 2025Updated 10 months ago
- repository for "GPCRact: a hierarchical framework for predicting ligand-induced GPCR activity via allosteric communication modeling"☆24Aug 30, 2026Updated 2 months ago
- ☆13May 26, 2022Updated 4 years ago
- Code to implement the DunedinPACE scoring algorithm in Illumina 450k or EPIC array data☆54Jun 6, 2025Updated last year
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆19May 15, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆18Apr 9, 2025Updated last year
- ☆12Nov 13, 2021Updated 4 years ago
- Code for "High-throughput and high-sensitivity full-length single-cell RNA-seq analysis on third-generation sequencing platform" paper. P…☆10Jun 21, 2024Updated 2 years ago
- ☆13Aug 6, 2025Updated last year
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 5 years ago
- Python package for processing and analyzing Illumina DNA methylation data☆12Jul 8, 2026Updated 3 months ago
- Prediction of Protein-Small molecule binding affinities☆23Oct 1, 2025Updated last year