☆18Sep 14, 2023Updated 3 years ago
Alternatives and similar repositories for saige-pipelines
Users that are interested in saige-pipelines are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Apr 10, 2024Updated 2 years ago
- ☆199May 2, 2022Updated 4 years ago
- ☆71Updated this week
- ☆12Aug 8, 2019Updated 7 years ago
- An R package for summarizing and visualizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies genera…☆14Oct 16, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆39Sep 17, 2026Updated last month
- Development for SAIGE and SAIGE-GENE(+)☆103Jun 26, 2026Updated 4 months ago
- Curated list of resources for variant prioritization☆16Nov 18, 2025Updated 11 months ago
- Genomics workflows for CPG using Hail Batch☆12Sep 8, 2026Updated last month
- Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatio…☆14Oct 22, 2025Updated last year
- TOPMed analysis pipeline☆52Oct 10, 2023Updated 3 years ago
- ☆12Sep 27, 2023Updated 3 years ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 8 years ago
- ☆12Nov 1, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 3 years ago
- ☆14Dec 2, 2022Updated 3 years ago
- ☆27Oct 22, 2026Updated 2 weeks ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆18Mar 10, 2018Updated 8 years ago
- ☆16Jan 5, 2018Updated 8 years ago
- ☆11Dec 8, 2022Updated 3 years ago
- ☆42May 22, 2024Updated 2 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆68Oct 22, 2025Updated last year
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆28Nov 9, 2024Updated last year
- ColabPCR: A validated Google Colaboratory Notebook for Reproducible and Precise Primer Design☆12May 4, 2026Updated 6 months ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆80Oct 2, 2026Updated last month
- A burrows-wheeler transform-based probabilistic short read mapper.☆11Jun 11, 2015Updated 11 years ago
- ☆19Oct 16, 2026Updated 2 weeks ago
- This guidance creates a scalable environment in AWS to prepare genomic, clinical, mutation, expression and imaging data for large-scale a…☆25Jun 30, 2025Updated last year
- Model Context Protocol server for gnomAD (Genome Aggregation Database) GraphQL API☆10Aug 13, 2025Updated last year
- PRINCESS source code☆11Oct 15, 2016Updated 10 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Agentic Shell (agish) is an experimental shell where commands are generated from english text☆14Jan 11, 2025Updated last year
- List of conferences with talk videos posted online☆12Sep 23, 2023Updated 3 years ago
- Simulating the expected output from a GWAS with a given causal model.☆12May 24, 2021Updated 5 years ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 5 years ago
- Genetics ToolboX R package☆32Feb 10, 2020Updated 6 years ago
- ☆12May 16, 2023Updated 3 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Nov 17, 2021Updated 4 years ago