FINNGEN / saige-pipelines
☆16Updated last year
Alternatives and similar repositories for saige-pipelines:
Users that are interested in saige-pipelines are comparing it to the libraries listed below
- genetic correlation between phenotypes in the UK biobank☆12Updated last year
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 6 months ago
- software package for integrative genetic association analysis☆34Updated last year
- ☆32Updated last year
- ☆18Updated 7 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated 3 weeks ago
- Manhattan++☆28Updated last year
- Create LocusZoom-style plots in R.☆21Updated 2 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆28Updated 2 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- Primo☆16Updated 3 years ago
- Estimate genetic correlation using predicted expression☆21Updated 7 years ago
- Scripts used for generating Neale Lab UKB results☆19Updated 2 years ago
- Stratified squared trans-ethnic genetic correlation☆12Updated 2 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 6 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 9 months ago
- This is the repository accompanying the pre-print titled, "Genome-wide analyses of 200,453 individuals yield new insights into the causes…☆12Updated 2 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- Genetics ToolboX R package☆31Updated 5 years ago
- ☆15Updated 7 years ago
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆38Updated last year
- A collection of various utilities for GWAS summary statistics☆27Updated 10 months ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 5 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- Colocalization analysis of genetic association signals☆51Updated 3 months ago
- Sequence kernel association test (SKAT)☆46Updated last month