FINNGEN / saige-pipelinesLinks
☆16Updated 2 years ago
Alternatives and similar repositories for saige-pipelines
Users that are interested in saige-pipelines are comparing it to the libraries listed below
Sorting:
- ☆16Updated 8 years ago
- genetic correlation between phenotypes in the UK biobank☆13Updated last year
- R package to perform Bayesian Genome-Wide Association Studies☆41Updated 2 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆53Updated 6 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- Create regional association plots from GWAS or meta-analysis☆61Updated 6 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆35Updated last month
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Updated 10 months ago
- ☆40Updated 8 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Updated last year
- ☆14Updated 3 years ago
- Get SNP proxies from the 1000 Genomes Project.☆30Updated 7 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆33Updated 7 months ago
- Flexible Bayesian inference of mutational signatures☆38Updated 2 years ago
- A Toolset for Chromosome X-Wide Association Studies☆12Updated 7 years ago
- ☆14Updated 2 months ago
- An R package for generating comparative regional association plots☆18Updated 3 months ago
- ☆22Updated 2 years ago
- Interactive eQTL visualizations☆13Updated 3 years ago
- software package for integrative genetic association analysis☆35Updated 2 years ago
- Sample code for ldsc analyses in UKBB☆32Updated 2 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- An interactive graphical illustration of genetic associations and their biological context☆17Updated last year
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- R package for RIVER (RNA-Informed Variant Effect on Regulation)☆12Updated 5 years ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated 10 months ago
- DriverPower☆26Updated last year
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- Filter and prioritize fusion calls☆20Updated last year