2018 Recommended Papers to Read in Bioinformatics as Voted by Bioinformaticians
☆26Jun 27, 2018Updated 8 years ago
Alternatives and similar repositories for Awesome-Bioinformatics
Users that are interested in Awesome-Bioinformatics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Sep 16, 2021Updated 4 years ago
- Workshop material for BioC Asia 2019☆13Dec 22, 2021Updated 4 years ago
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆13Oct 26, 2022Updated 3 years ago
- Docker image for the DeepBind method.☆16Nov 7, 2015Updated 10 years ago
- Review Paper: Deep Learning for Genomics: A Concise Overview☆13Mar 13, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Inference of gene dependency from RNAi screening datasets.☆19Apr 9, 2020Updated 6 years ago
- Bioinformatics 2020: FastSK: Fast and Accurate Sequence Classification by making gkm-svm faster and scalable. https://fastsk.readthedocs.…☆21Dec 8, 2022Updated 3 years ago
- Workflow Description Language - Specification and Implementations☆27Mar 19, 2019Updated 7 years ago
- screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics☆10Oct 29, 2020Updated 5 years ago
- ☆12Apr 5, 2022Updated 4 years ago
- ☆11Feb 9, 2024Updated 2 years ago
- Raspir, the rare species identifier☆11Oct 19, 2023Updated 2 years ago
- Prediction of microbial interactions in complex communities☆14Aug 14, 2024Updated last year
- Example usage of the Benchling API: https://docs.benchling.com/☆37Jun 10, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python CLI for alignment-free genomics.☆13May 25, 2026Updated last month
- MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data☆13Jun 9, 2026Updated last month
- Repository for signature genes from Immune Cell Atlas☆20Sep 25, 2019Updated 6 years ago
- Slides for my talk at RUG Barcelona 2017-06-13☆12Jun 13, 2017Updated 9 years ago
- Academic project for Advances in Data Science and Architecture course☆13Jan 20, 2018Updated 8 years ago
- R package with Shiny application for DGE analysis☆12Jan 8, 2024Updated 2 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆95Jul 18, 2017Updated 8 years ago
- ☆16Jun 26, 2025Updated last year
- TCGA BLCA tmb prediction by Hongming Xu☆13Nov 1, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆14Sep 15, 2023Updated 2 years ago
- Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022☆13Jan 8, 2024Updated 2 years ago
- Pytorch implementation of Count-ception and custom CNN counting models for Kaggle Sea Lion Count challenge☆11Jun 30, 2017Updated 9 years ago
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Feb 7, 2022Updated 4 years ago
- Python argparse skeleton☆10Feb 9, 2021Updated 5 years ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆33Nov 9, 2019Updated 6 years ago
- rmd to docx: draft manuscript☆18Mar 22, 2017Updated 9 years ago
- ☆10Dec 4, 2023Updated 2 years ago
- This is the package of Yuanfang's winning algorithm in the ENCODE-DREAM in vivo Transcription Factor Binding Site Prediction Challenge☆20Jun 11, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Dec 14, 2016Updated 9 years ago
- ☆10Aug 29, 2012Updated 13 years ago
- Teaching materials for SymbNET course: from MAGs to GEMs☆15Jan 8, 2024Updated 2 years ago
- ☆15Oct 14, 2023Updated 2 years ago
- Implementation of CoNet in R☆16Oct 16, 2019Updated 6 years ago
- ☆17May 27, 2026Updated last month
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11May 19, 2019Updated 7 years ago