GuanLab / Awesome-BioinformaticsLinks
2018 Recommended Papers to Read in Bioinformatics as Voted by Bioinformaticians
☆26Updated 7 years ago
Alternatives and similar repositories for Awesome-Bioinformatics
Users that are interested in Awesome-Bioinformatics are comparing it to the libraries listed below
Sorting:
- Genetics training camp☆21Updated 5 years ago
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆45Updated last year
- ☆77Updated 4 years ago
- ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms☆18Updated 3 years ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆46Updated 2 years ago
- Data and analysis for the Splatter paper☆29Updated 8 years ago
- Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"☆33Updated 6 years ago
- BioBombe: Sequentially compressed gene expression features enhances biological signatures☆65Updated last year
- R package for plotting 3D graphical visualization of multi-omics data.☆23Updated 3 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated last month
- Topics In Data Science and Bioinformatics☆79Updated last year
- Modelling DNA methylation profiles☆24Updated 5 years ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆19Updated 6 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- 📓Notebook of Climente-González et al. (2017), The Functional Impact of Alternative Splicing in Cancer.☆14Updated 7 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- This is a companion repository for the article "Comparative analysis of machine learning classifiers and calibration algorithms for estim…☆23Updated 3 years ago
- Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.☆26Updated 7 months ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆106Updated 2 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 3 weeks ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆49Updated 2 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆50Updated 2 years ago
- ☆12Updated last year
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- ☆32Updated last week
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Updated 2 years ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 7 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆40Updated 4 years ago
- Main codes for AD epigenetics paper by Nativio et al.☆11Updated 6 years ago
- We have moved to https://github.com/limix/limix.☆23Updated 8 years ago