Alternatives and similar repositories for pathway:

Users that are interested in pathway are comparing it to the libraries listed below

• JLSteenwyk / latch_library
  A library of code snippets used in Latch SDK development
  ☆11Updated last year
• latch-verified / bulk-rnaseq
  Bulk RNA-seq analysis.
  ☆34Updated last year
• liuyigh / PyHRM
  High Resolution Melt Analysis in Python
  ☆20Updated 2 years ago
• fulcrumgenomics / guide-counter
  A better, faster way to count guides in CRISPR screens.
  ☆31Updated last month
• niemasd / ViralMSA
  Reference-guided multiple sequence alignment of viral genomes
  ☆65Updated last week
• nf-core / airrflow
  B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
  ☆56Updated last week
• GMOD / jbrowse-jupyter
  A python package for showing JBrowse views
  ☆23Updated last year
• foerstner-lab / gffpandas
  Parse GFF3 into Pandas dataframes
  ☆26Updated 10 months ago
• Kuanhao-Chao / splam
  ✂️ Deep learning-based splice site predictor that improves spliced alignments
  ☆41Updated this week
• althonos / lightmotif
  A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
  ☆42Updated last month
• gladstone-institutes / Interactive-Enrichment-Analysis
  A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
  ☆28Updated this week
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆106Updated 10 months ago
• hms-dbmi / chromoscope
  Interactive multiscale visualization for structural variation in human genomes
  ☆67Updated this week
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆22Updated 8 months ago
• dbikard / genomenotebook
  A genome browser in your Jupyter notebook
  ☆30Updated 3 weeks ago
• kundajelab / simdna
  A python library for creating simulated regulatory DNA sequences
  ☆38Updated last year
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆40Updated 2 years ago
• mourisl / Rcorrector
  Error correction for Illumina RNA-seq reads
  ☆64Updated 10 months ago
• InscriptaLabs / BioCantor
  ☆21Updated last year
• qhtjrmin / GPrimer
  GPrimer: a fast GPU-based pipeline for primerdesign for qPCR experiments
  ☆10Updated 2 years ago
• nf-core / rnavar
  gatk4 RNA variant calling pipeline
  ☆40Updated this week
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆30Updated last year
• nf-core / epitopeprediction
  A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
  ☆43Updated 3 weeks ago
• fulcrumgenomics / fqtk
  Fast FASTQ sample demultiplexing in Rust.
  ☆58Updated last month
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 3 years ago
• alevar / ORFanage
  Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…
  ☆23Updated last month
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆33Updated this week
• pinellolab / PrimeDesign
  Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!
  ☆23Updated 2 years ago
• enasequence / enaBrowserTools
  A collection of scripts to assist in the retrieval of data from the ENA Browser
  ☆75Updated 9 months ago
• ialbert / bio
  Making bioinformatics fun again
  ☆63Updated 7 months ago