latch-verified / pathwayLinks
Associate pathways + gene ontologies with significant genes.
☆10Updated 2 years ago
Alternatives and similar repositories for pathway
Users that are interested in pathway are comparing it to the libraries listed below
Sorting:
- High Resolution Melt Analysis in Python☆21Updated 3 years ago
- A python library for creating simulated regulatory DNA sequences☆39Updated 2 years ago
- Bulk RNA-seq analysis.☆35Updated last year
- GPrimer: a fast GPU-based pipeline for primerdesign for qPCR experiments☆10Updated 3 months ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- Example usage of the Benchling API: https://docs.benchling.com/☆35Updated 3 months ago
- Example genomics data for tool developers☆116Updated last year
- Find common blocks and differences between DNA sequences☆42Updated 5 months ago
- Suite of tools for processing BRB-seq data☆29Updated 3 months ago
- A cookiecutter template for Snakemake workflows☆59Updated 3 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆44Updated 9 years ago
- Python wrapper around Nextflow.☆60Updated 3 weeks ago
- Nextflow pipeline for hyperparameter optimization of machine learning models☆24Updated last year
- A python wrapper for the benchling api☆50Updated 5 years ago
- An RNA manipulation library.☆57Updated last year
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Updated 2 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated last week
- Project Manager for NGS data analysis☆31Updated 3 years ago
- A better, faster way to count guides in CRISPR screens.☆33Updated 5 months ago
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Updated 4 years ago
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- Python biomart API☆68Updated 2 years ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆24Updated last year
- Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id☆46Updated 2 years ago
- GeneWalk identifies relevant gene functions for a biological context using network representation learning☆131Updated last year
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆20Updated 4 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated last week
- Efficient target prediction incorporating accessibility of interaction sites☆49Updated last week
- Interactive multiscale visualization for structural variation in human genomes☆70Updated 3 weeks ago
- ☆16Updated 8 months ago