twz915 / pubmed
Get literature information via PubMed ID, such as the author, title, journal_name, pub_date and so on.
☆17Updated 8 years ago
Related projects: ⓘ
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆62Updated 2 months ago
- hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …☆18Updated last year
- MyVariant.info: A BioThings API for human variant annotations☆87Updated last week
- simplified searching, fetching, and parsing records from NCBI using their E-utilities interface☆58Updated 2 months ago
- Associations of genomic features, drugs and diseases☆48Updated last year
- Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data☆87Updated 4 years ago
- Library for manipulating genomic variants and predicting their effects☆81Updated 2 months ago
- A false-positive filter for variants called from massively parallel sequencing☆29Updated 7 years ago
- Biopet docs☆17Updated 6 years ago
- python access to UCSC genomes database☆134Updated 4 years ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 5 years ago
- A Rare Variant Caller for Array-based Genotyping☆25Updated 9 years ago
- Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…☆51Updated 7 years ago
- phenotype-based prioritization of candidate genes for human diseases☆64Updated last year
- Phenotype driven gene prioritization for HPO☆43Updated 3 years ago
- A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list☆35Updated last year
- ☆67Updated 2 years ago
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 6 years ago
- Python client for MyVariant.info web services.☆22Updated 2 years ago
- integrated RNA-seq Analysis Pipeline☆82Updated 5 years ago
- Efficient handling of FASTQ files from Python☆50Updated 2 weeks ago
- Deprecated : Use https://github.com/drpowell/degust☆44Updated 7 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 2 years ago
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆32Updated 7 years ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆74Updated 5 months ago
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆87Updated last month
- HGVS variant nomenclature checker☆98Updated last year
- REVOLVER - Repeated Evolution in Cancer☆64Updated last year
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆86Updated 6 years ago
- Sanity check Variant Call Format (VCF) files.☆34Updated 8 years ago