libnano / primer3-pyLinks
Simple oligo analysis and primer design
☆178Updated last month
Alternatives and similar repositories for primer3-py
Users that are interested in primer3-py are comparing it to the libraries listed below
Sorting:
- a python package for fast random access to sequences from plain and gzipped FASTA/Q files☆283Updated 6 months ago
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆420Updated 6 months ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆124Updated 5 years ago
- ☆279Updated 4 months ago
- Package for fetching metadata and downloading data from SRA/ENA/GEO☆334Updated this week
- Plot structural variant signals from many BAMs and CRAMs☆544Updated 11 months ago
- Windowed Adaptive Trimming for fastq files using quality☆221Updated 8 years ago
- Extension for Jupyter which integrates igv.js☆154Updated 2 years ago
- breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It…☆162Updated 2 weeks ago
- Read trimming tool for Illumina NGS data.☆138Updated 10 years ago
- classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF☆230Updated last month
- Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).☆254Updated last month
- GFF and GTF file manipulation and interconversion☆301Updated last year
- Genome-scale protein function classification☆334Updated this week
- TransDecoder source☆291Updated 8 months ago
- Nanopore demultiplexing, QC and alignment pipeline☆203Updated 3 weeks ago
- RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.☆262Updated last month
- Download FASTQ files from SRA or ENA repositories.☆336Updated last week
- Miscellaneous collection of Python and R scripts for processing Iso-Seq data☆269Updated last year
- Pipeline to fetch metadata and raw FastQ files from public databases☆177Updated 2 weeks ago
- Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files☆110Updated this week
- SortMeRNA: next-generation sequence filtering and alignment tool☆271Updated 5 months ago
- Pilon is an automated genome assembly improvement and variant detection tool☆367Updated 3 years ago
- 3D de novo assembly (3D DNA) pipeline☆212Updated last year
- UCSC Genome Browser source tree. Stable branch: "beta".☆236Updated this week
- Documentation for the ANNOVAR software☆243Updated 3 months ago
- Mummer alignment tool☆516Updated 4 months ago
- Match up paired end fastq files quickly and efficiently.☆150Updated last year
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆160Updated 2 years ago
- PacBio Secondary Analysis Tools on Bioconda. Contains list of PacBio packages available via conda.☆270Updated 4 months ago