A Chinese-based Repo for Transformer Starters on Its Everything.
☆36Jan 31, 2025Updated last year
Alternatives and similar repositories for Transformer-WalkThrough
Users that are interested in Transformer-WalkThrough are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- How many distinct k-mers are there in a sequence?☆11Oct 26, 2026Updated last week
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated last year
- Benchmark data structures for kmer sets.☆13Aug 29, 2026Updated 2 months ago
- Compute hash digests for DNA sequences in a FASTA file☆13May 31, 2026Updated 5 months ago
- [ACL 2025] TokAlign: Efficient Vocabulary Adaptation via Token Alignment☆12Jun 4, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A genome alignment and visualization system☆10Apr 30, 2024Updated 2 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆15Mar 14, 2024Updated 2 years ago
- In-browser tools for bacterial genome analysis 🦅☆12Oct 21, 2026Updated 2 weeks ago
- Guess till correct: Gungnir codec enabling high error-tolerance and low-redundancy DNA storage through substantial computing power☆13Mar 2, 2026Updated 8 months ago
- Strain-level abundance analysis tool for short-read metagenomics☆12Jul 12, 2026Updated 3 months ago
- API for the IGS data portal☆11May 6, 2021Updated 5 years ago
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- Map query sequences to the assemblies of all pre-June 2023 bacteria (https://ftp.ebi.ac.uk/pub/databases/AllTheBacteria/Releases/0.2/) on…☆12May 22, 2024Updated 2 years ago
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated 2 years ago
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) among virus and bacteria genomes☆13Sep 12, 2026Updated last month
- ViBE: a hierarchical BERT model to identify viruses using metagenome sequencing data☆11Sep 6, 2022Updated 4 years ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- ☆10Jun 9, 2025Updated last year
- HyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NG…☆12Sep 18, 2024Updated 2 years ago
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated 2 years ago
- Hierarchical binned indexed data store for on-disk genomic data.☆13Jan 18, 2025Updated last year
- RNA-Seq sampling☆12Sep 28, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Jaeger is a quick and precise tool for detecting viruses in sequence assemblies.☆11Oct 14, 2026Updated 3 weeks ago
- ☆11Jun 24, 2024Updated 2 years ago
- Mutation tracker for microbial genomes☆14Sep 30, 2020Updated 6 years ago
- Pairwise genome comparison pipeline using the LAST software to align a list of query genomes to a target genome, and plot the results☆11Updated this week
- ⭐A simple, fast and powerful blog & document theme built by Astro to build you own knowledge base☆15Jul 29, 2026Updated 3 months ago
- PlasRAG is a deep learning-based tool specifically designed for analyzing plasmids, which serves two purposes: (1) plasmid property chara…☆10Dec 24, 2025Updated 10 months ago
- ☆13Oct 27, 2026Updated last week
- Genomic Tokenizer: Biology-driven Tokenizer for DNA sequences☆14Jan 26, 2026Updated 9 months ago
- A Visual Analytics Tool for Pangenomic Variant Analysis☆12Jun 23, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- VirMake is a Snakemake based pipeline that offers viral metagenic data analysis on paired-end data. It offers taxonomic and functional an…☆10Updated this week
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.☆10Dec 20, 2021Updated 4 years ago
- Strain-level metagenomic classification with Metagenome Assembly driven Database Reduction approach☆12Oct 27, 2026Updated last week
- Snakemake port of the original Galba pipeline☆13Oct 27, 2026Updated last week
- Awesome lists of metagenome-assembled genome (MAG) datasets☆19Updated this week
- ☆12Jun 7, 2024Updated 2 years ago
- ☆15Dec 3, 2024Updated last year