snakemake-powered cli to download genomes using NCBI datasets
☆15Aug 14, 2025Updated last year
Alternatives and similar repositories for assembly_finder
Users that are interested in assembly_finder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- zDB: comparative bacterial genomics made easy☆42May 6, 2026Updated 3 months ago
- ☆10Jun 9, 2025Updated last year
- Snakemake pipeline for simulating shotgun metagenomic samples☆32Mar 13, 2026Updated 5 months ago
- software to identify primers that can distinguish genomes☆20Jan 23, 2026Updated 6 months ago
- A repo with just adapter sequences☆15Jul 7, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆38Jun 4, 2026Updated 2 months ago
- TAXnomic Profile Aggregation and STAndardisation☆44May 2, 2026Updated 3 months ago
- Finding regions of similarity between plasmids☆17Jul 15, 2026Updated last month
- PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.