This is a Python implementation of the sequence design algorithm DAEDALUS for scaffolded DNA origami
☆18Feb 23, 2024Updated 2 years ago
Alternatives and similar repositories for pyDAEDALUS
Users that are interested in pyDAEDALUS are comparing it to the libraries listed below
Sorting:
- Designer scaffolded DNA DX-based wireframe lattices☆14Jul 28, 2018Updated 7 years ago
- A GUI for automated sequence design of wireframe scaffolded DNA origami☆14Nov 3, 2021Updated 4 years ago
- Python scripting library for generating designs readable by scadnano.☆16Updated this week
- DNA origami design tool☆39Jan 18, 2024Updated 2 years ago
- A set of tools to analyze oxDNA/oxRNA simulations of DNA/RNA☆20Jul 7, 2022Updated 3 years ago
- Cadnano2☆60Feb 12, 2025Updated last year
- SNUPI (Structured NUcleic-acids Programming Interface)☆15Feb 19, 2025Updated last year
- Computational analysis of nucleic acids structures using graph neural networks☆15Mar 25, 2024Updated last year
- oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis☆54Feb 19, 2026Updated last week
- A collection of tools for DNA modelling☆23Aug 9, 2025Updated 6 months ago
- ☆25Feb 27, 2023Updated 3 years ago
- Web application for designing DNA structures such as DNA origami.☆33Feb 20, 2026Updated last week
- ☆10Sep 29, 2022Updated 3 years ago
- Build-A-Cell protocol for making liposomes☆13Jan 30, 2024Updated 2 years ago
- SPIDER-WEB generates coding algorithms with superior error tolerance and real-time information retrieval capacity☆11Jun 21, 2024Updated last year
- ☆10Apr 17, 2019Updated 6 years ago
- ☆13Sep 7, 2024Updated last year
- heterozygosity-based estimator of Rho - https://academic.oup.com/genetics/advance-article/doi/10.1093/genetics/iyac100/6623412☆10Aug 24, 2025Updated 6 months ago
- DNA-D2S: a systematic error simulation Model for DNA Data Storage channel☆12Feb 14, 2022Updated 4 years ago
- Train a language model using subtitles from all the Harry Potter films.☆12Jan 31, 2017Updated 9 years ago
- Document binarization using deep learning☆10Dec 31, 2020Updated 5 years ago
- Spark. Maintained and improved upon for 1.12.2.☆13Dec 10, 2025Updated 2 months ago
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 3 months ago
- Backport 1.13 and up to 1.12.2☆10Updated this week
- (Re)Configuration toolkit☆14Feb 19, 2026Updated last week
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆24Updated this week
- ☆15Dec 19, 2025Updated 2 months ago
- ☆13Mar 17, 2024Updated last year
- ☆10Aug 26, 2016Updated 9 years ago
- Example of bazel python cpp binding☆10May 27, 2023Updated 2 years ago
- GUI for managing Minecraft modpacks via packwiz☆16Jan 29, 2026Updated last month
- Install and use Julia packages with a single command on systems that may or may not already have Julia.☆13May 2, 2025Updated 10 months ago
- LDPC codes for Illumina sequencing-based DNA storage☆11Dec 2, 2020Updated 5 years ago
- M e s t R e N o v a 1 2 . 0 Patch for Win/Mac and A D F 2 0 1 2 Patch for Win/Linux☆13Jul 21, 2025Updated 7 months ago
- DNA-based End-to-End Encrypted EFS Database created using Python 🧬☆11Dec 21, 2023Updated 2 years ago
- Source code for the DeepViral paper☆10Mar 17, 2021Updated 4 years ago
- An easy to use chrome extension that new developers can use to make their own chrome extensions☆11Aug 4, 2024Updated last year
- SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) …☆23Dec 12, 2025Updated 2 months ago
- Classify DNA sequence into Binary class using different Classification algorithms.☆11Feb 24, 2024Updated 2 years ago