☆51Jun 17, 2026Updated last month
Alternatives and similar repositories for MemProtMD
Users that are interested in MemProtMD are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automatic Martini force field generator for small organic molecules (up to 25 heavy atoms), Martini 3 compatible☆40Updated this week
- Collection of Python scripts to setup and run simulations with OpenMM☆17May 22, 2020Updated 6 years ago
- Conversion of coarsegrain to atomistic (complete rewrite of the original CG2AT)☆37Jul 17, 2024Updated 2 years ago
- INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems☆91Apr 19, 2026Updated 3 months ago
- A python toolkit for analysing membrane protein-lipid interactions.☆71Mar 30, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Algorithm for identifying hydrogen bond networks in CG proteins to implement Go-like Martini 3 models☆17Oct 25, 2024Updated last year
- Weighted Ensemble Data Analysis and Plotting☆27Updated this week
- ☆13Jul 17, 2025Updated last year
- A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"☆38Oct 30, 2023Updated 2 years ago
- Molecular visualization for MDAnalysis with MolecularNodes in Blender☆21Mar 30, 2025Updated last year
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆33Jan 17, 2023Updated 3 years ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆37May 28, 2024Updated 2 years ago
- Free Parametrization for Small Molecules☆66Jun 30, 2026Updated 3 weeks ago
- An application for configuring and running simulations with OpenMM☆81Oct 30, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Cloud-based Drug Binding Structure Prediction☆48Jul 13, 2026Updated last week
- Cloud-based molecular simulations for everyone☆498Jan 20, 2026Updated 6 months ago
- Constant pH simulation with OpenMM☆20Mar 10, 2026Updated 4 months ago
- A command line application to launch molecular dynamics simulations with OpenMM☆40Apr 7, 2022Updated 4 years ago
- A Light-Weight And Interpretable Molecular Docking Model☆26Oct 23, 2024Updated last year
- Repository for material from the 2022 MC/MD Summer Workshop☆14Jul 12, 2024Updated 2 years ago
- A repository providing jupyter notebooks and simulation inputs that accompany the mini course Hands-on tutorials: Advanced sampling metho…☆24Sep 26, 2024Updated last year
- ☆15Sep 19, 2024Updated last year
- ☆13May 18, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆50Jun 15, 2026Updated last month
- TS2CG version 2☆27Apr 18, 2026Updated 3 months ago
- ☆23Apr 8, 2026Updated 3 months ago
- Protein ribbon plots implemented in Julia using Makie☆25Jun 22, 2026Updated 3 weeks ago
- ☆90Jul 19, 2023Updated 3 years ago
- Helper function for Markov State Models☆11Jun 25, 2024Updated 2 years ago
- volume calculation and segmentation☆39May 20, 2024Updated 2 years ago
- ☆29Feb 27, 2026Updated 4 months ago
- ☆12May 6, 2021Updated 5 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…