srnas / barnaba
Analyse Nucleic Acids Structure and Simulations with baRNAba
☆41Updated 8 months ago
Related projects ⓘ
Alternatives and complementary repositories for barnaba
- An open-source library for the analysis of protein interactions.☆29Updated 2 years ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆27Updated 7 months ago
- Calculation of interatomic interactions in molecular structures☆79Updated 2 months ago
- Pras Server is a library to repair PDB or mmCIF structures, add missing heavy atoms and hydrogen atoms and assign secondary structure by …☆25Updated 4 months ago
- Python interface for the RCSB PDB search API.☆53Updated last month
- PyDock Tutorial☆30Updated 6 years ago
- ☆32Updated 3 months ago
- ☆62Updated 4 months ago
- ☆34Updated 2 months ago
- FreeSASA Python Module☆48Updated last year
- ☆31Updated last week
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆64Updated 2 months ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆17Updated 9 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆37Updated 6 months ago
- Trusted force field files for gromacs☆40Updated 3 weeks ago
- Contact map analysis for biomolecules; based on MDTraj☆42Updated 4 months ago
- An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM☆35Updated 3 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆35Updated last year
- A python toolkit for analysing membrane protein-lipid interactions.☆60Updated last year
- An implementation of the 3SPN2 and 3SPN2.C coarse-grained DNA forcefields in OpenMM☆18Updated 6 months ago
- Simple protein-ligand complex simulation with OpenMM☆73Updated last year
- Protein structure descriptors and alignment based on 3D Zernike moments.☆33Updated 9 months ago
- Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over pop…☆50Updated 3 weeks ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆60Updated 2 months ago
- Analysis of contacts in molecular dynamics trajectories☆41Updated 5 years ago
- ☆85Updated last year
- Modeling with limited data☆54Updated last week
- Statistical models for biomolecular dynamics☆37Updated last month
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆13Updated this week
- Automated construction of protein chimeras and their analysis.☆15Updated last year