srnas / barnabaLinks
Analyse Nucleic Acids Structure and Simulations with baRNAba
☆47Updated last year
Alternatives and similar repositories for barnaba
Users that are interested in barnaba are comparing it to the libraries listed below
Sorting:
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆97Updated 6 months ago
- Material from papers from KULL centre☆71Updated last year
- Calculation of interatomic interactions in molecular structures☆115Updated last year
- ☆80Updated 2 months ago
- FreeSASA Python Module☆58Updated 4 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆134Updated 2 years ago
- Python interface for the RCSB PDB search API.☆65Updated 9 months ago
- ☆69Updated last year
- Calculation of interatomic interactions in molecular structures☆83Updated 3 years ago
- ☆47Updated last month
- Simple protein-ligand complex simulation with OpenMM☆91Updated 2 years ago
- Protein and nucleic acid validation service☆92Updated last year
- Protein structure descriptors and alignment based on 3D Zernike moments.☆39Updated last week
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆30Updated last month
- ☆89Updated last year
- ☆19Updated 8 months ago
- A simple Python library to generate model peptides☆91Updated 5 years ago
- Slides + Iframe = sliFrame☆55Updated 8 months ago
- An open-source library for the analysis of protein interactions.☆33Updated 4 years ago
- mdml: Deep Learning for Molecular Simulations☆48Updated 7 months ago
- Modelling of Large Protein Complexes☆39Updated 4 months ago
- ☆34Updated last year
- PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.☆146Updated 10 months ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆36Updated last month
- PyDock Tutorial☆35Updated 7 years ago
- An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM☆38Updated 7 months ago
- Analysis of contacts in molecular dynamics trajectories☆45Updated 6 years ago
- ☆34Updated 2 years ago