srnas / barnabaLinks
Analyse Nucleic Acids Structure and Simulations with baRNAba
☆45Updated last year
Alternatives and similar repositories for barnaba
Users that are interested in barnaba are comparing it to the libraries listed below
Sorting:
- Material from papers from KULL centre☆69Updated last year
- Calculation of interatomic interactions in molecular structures☆78Updated 3 years ago
- ☆69Updated 2 months ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆127Updated 2 years ago
- ☆16Updated 4 months ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Protein and nucleic acid validation service☆86Updated last year
- Python interface for the RCSB PDB search API.☆64Updated 5 months ago
- A simple Python library to generate model peptides☆87Updated 4 years ago
- FreeSASA Python Module☆56Updated 3 weeks ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆91Updated 2 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆96Updated 2 years ago
- Calculation of interatomic interactions in molecular structures☆105Updated 11 months ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆34Updated last month
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆27Updated this week
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆72Updated 4 months ago
- ☆45Updated 3 months ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆67Updated 2 months ago
- Simple protein-ligand complex simulation with OpenMM☆87Updated last year
- ☆68Updated last year
- Modeling with limited data☆59Updated last month
- Software for biomolecular electrostatics and solvation calculations☆107Updated 11 months ago
- Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over pop…☆60Updated 2 weeks ago
- Package for storage and analysis of virtual screenings run with AutoDock-GPU and AutoDock Vina☆52Updated 2 months ago
- AutoDock CrankPep for peptide and disordered protein docking☆51Updated 4 years ago
- mdml: Deep Learning for Molecular Simulations☆47Updated 3 months ago
- Modelling of Large Protein Complexes☆37Updated 3 weeks ago
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆51Updated 3 weeks ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆75Updated last year
- PyDock Tutorial☆33Updated 7 years ago