google-deepmind / protexLinks
☆19Updated 9 months ago
Alternatives and similar repositories for protex
Users that are interested in protex are comparing it to the libraries listed below
Sorting:
- ☆51Updated 3 months ago
- ☆66Updated 3 years ago
- Efficient implementatin of ESM family.☆58Updated 5 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆63Updated 5 months ago
- ☆39Updated last month
- Active Learning-Assisted Directed Evolution for Protein Engineering☆61Updated 8 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆57Updated 4 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆59Updated last year
- Learning the language of protein-protein interactions☆81Updated last week
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆64Updated last year
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆51Updated 3 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆64Updated 3 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆101Updated 2 months ago
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆20Updated 2 years ago
- Fast indexing and search of discontinuous motifs in protein structures☆58Updated this week
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆57Updated 7 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated last month
- Protein folding in Pymol☆109Updated 6 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆78Updated last year
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆43Updated 10 months ago
- ☆26Updated 3 weeks ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated 2 months ago
- AlphaFold-initiated replica exchange protein docking☆83Updated last month
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆115Updated 4 months ago
- PLM based active learning model for protein engineering☆82Updated 11 months ago
- A generalized enzyme kinetics parameter prediction model.☆53Updated 3 weeks ago
- ☆43Updated 6 months ago
- ☆70Updated 4 months ago
- Protein Structure Analysis☆55Updated 3 weeks ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago