google-deepmind / protexLinks
☆20Updated 4 months ago
Alternatives and similar repositories for protex
Users that are interested in protex are comparing it to the libraries listed below
Sorting:
- Efficient implementatin of ESM family.☆80Updated 4 months ago
- ☆56Updated 5 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…☆63Updated 3 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆113Updated last week
- Efficient manipulation of protein structures in Python☆61Updated 4 months ago
- Learning the language of protein-protein interactions☆127Updated 3 weeks ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆71Updated last year
- ☆76Updated 4 years ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆78Updated 3 months ago
- ☆53Updated last month
- Official repository for the ProteinDJ protein design pipeline☆84Updated 2 weeks ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46Updated 8 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆91Updated last year
- Toolkit for alphafold3 input and output files☆95Updated 3 weeks ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆70Updated 5 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆194Updated last month
- ☆41Updated 5 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated last month
- One protein is all you need (ICLR 2026)☆66Updated last month
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆62Updated 3 weeks ago
- Protein folding in Pymol☆137Updated 2 months ago
- ☆128Updated 2 weeks ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆115Updated 6 months ago
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆56Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆110Updated last week
- Analysis of alphafold and colabfold results☆34Updated last month
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆42Updated 6 months ago
- ☆109Updated last month
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆60Updated 3 months ago