NREL / EvoProtGrad
Directed evolution of proteins in sequence space with gradients
☆84Updated 8 months ago
Alternatives and similar repositories for EvoProtGrad:
Users that are interested in EvoProtGrad are comparing it to the libraries listed below
- Improved antibody structure-based design using inverse folding☆108Updated 3 weeks ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆111Updated 3 weeks ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆51Updated 8 months ago
- Sandbox for Deep-Learning based Computational Protein Design☆110Updated last month
- Aligning protein generative models with experimental fitness☆89Updated 5 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆68Updated 5 months ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆92Updated this week
- AlphaBind code + model accompanying pre-print☆49Updated 3 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆115Updated last week
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆91Updated 8 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆71Updated 11 months ago
- ☆100Updated 2 years ago
- Fitness landscapes for antibodies☆68Updated 3 months ago
- Dataset and package for working with protein-protein interactions in 3D☆90Updated 2 months ago
- Predict the structure of immune receptor proteins☆133Updated 2 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆53Updated 3 weeks ago
- ☆77Updated last month
- Protein design and variant prediction using autoregressive generative models☆97Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated 3 months ago
- Making Protein Modeling Accessible to All Biologists☆106Updated last week
- ☆37Updated 3 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆72Updated last month
- Structure prediction of alternative protein conformations☆75Updated last month
- PLM based active learning model for protein engineering☆77Updated 8 months ago
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- ☆62Updated 3 years ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆111Updated 4 months ago
- Official repository of EnzymeFlow☆85Updated 4 months ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆97Updated 6 months ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆62Updated last month