Deep convolutional networks for fold recognition
☆22Nov 8, 2019Updated 6 years ago
Alternatives and similar repositories for 3DCNN_MQA
Users that are interested in 3DCNN_MQA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepContact Software☆26Jun 16, 2018Updated 7 years ago
- Learning protein structure with a differentiable simulator☆27Jul 8, 2019Updated 6 years ago
- Protein quality assessment using Graph Convolutional Networks☆28Oct 11, 2022Updated 3 years ago
- ☆26May 9, 2022Updated 3 years ago
- Deep convolutional neural networks for protein contact map prediction☆23Aug 5, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Fully convolutional neural networks for protein residue-residue contact prediction☆44Mar 25, 2019Updated 7 years ago
- Python/TF1 implementation of DeepAccNet (https://www.biorxiv.org/content/10.1101/2020.07.17.209643v1)☆10Sep 2, 2020Updated 5 years ago
- Recurrent Geometric Network in Pytorch☆28Oct 14, 2020Updated 5 years ago
- Contact map alignment☆43Feb 3, 2021Updated 5 years ago
- A method for identifying deleterious protein variation.☆11Nov 14, 2016Updated 9 years ago
- ☆34Jul 3, 2024Updated last year
- Physical energy function for protein sequence design☆38May 6, 2023Updated 2 years ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆89Jun 18, 2021Updated 4 years ago
- Faster, more accurate and entirely open source method for predicting contacts in proteins☆12May 21, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Fast and easy contact prediction.☆38May 24, 2024Updated last year
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36May 30, 2021Updated 4 years ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆74Dec 14, 2023Updated 2 years ago
- Contact Prediction ToolKit☆22Mar 13, 2026Updated last month
- A scoring function model based on 3D convolutional neural network for protein-ligand binding affinity prediction.☆17Oct 8, 2021Updated 4 years ago
- OPUS-Fold: An Open-Source Protein Folding Framework Based on Torsion-Angle Sampling☆21May 4, 2020Updated 5 years ago
- Recurrent Geometric Networks for end-to-end differentiable learning of protein structure☆324Aug 1, 2019Updated 6 years ago
- ☆40Mar 25, 2026Updated 3 weeks ago
- PyTorch library of layers acting on protein representations☆119Jun 30, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A curated list of the best bioinformatics books, all in one place☆13Oct 12, 2015Updated 10 years ago
- ☆29Jul 10, 2020Updated 5 years ago
- Julia tools for reading Crystallographic Information Framework (CIF) files and dictionaries☆15Apr 10, 2026Updated last week
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆31Jan 8, 2024Updated 2 years ago
- A Python tool for parsing and analyzing electron density maps data available from the worldwide Protein Data Bank☆12Sep 28, 2023Updated 2 years ago
- Gradients for dynamic programming☆17Nov 10, 2023Updated 2 years ago
- Screen interactions with AlphaFold Multimer☆14Mar 10, 2025Updated last year
- ☆16Dec 10, 2024Updated last year
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆84Feb 28, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆35Jun 29, 2024Updated last year
- A PyTorch framework for prediction of tertiary protein structure☆193Jun 8, 2021Updated 4 years ago
- A geometric deep learning framework (Geometric Transformers) for predicting protein interface contacts. (ICLR 2022)☆66Jun 20, 2022Updated 3 years ago
- Code for ICLR2018 paper: Improving GAN Training via Binarized Representation Entropy (BRE) Regularization - Y. Cao · W Ding · Y.C. Lui · …☆20Jun 12, 2018Updated 7 years ago
- to assess structural quality of RNA using 3D CNN☆14Aug 17, 2018Updated 7 years ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Nov 12, 2021Updated 4 years ago
- An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs☆13Jun 28, 2024Updated last year