Alternatives and similar repositories for saab_plus:

Users that are interested in saab_plus are comparing it to the libraries listed below

• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆48Updated 5 months ago
• songlab-cal / CPT
  Cross-protein transfer learning for variant effect prediction
  ☆20Updated last year
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆58Updated 4 years ago
• alchemab / parapred-pytorch
  PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)
  ☆20Updated last year
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆24Updated 3 years ago
• haiyuan-yu-lab / PIONEER
  ☆25Updated 4 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆36Updated this week
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆38Updated last month
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆37Updated last year
• Doudna-lab / GARNET_DL
  ☆36Updated 3 months ago
• yjcyxky / antibody-dl
  A Collection of Platform, Tools, and Resources for Antibody Engineering
  ☆15Updated last year
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated last year
• jurgjn / af-protein-universe
  ☆24Updated last year
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆27Updated this week
• schumacherlab / STAPLER
  STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…
  ☆26Updated last week
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆24Updated 2 months ago
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆26Updated last year
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆55Updated last year
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆90Updated last year
• lehner-lab / domainome
  ☆13Updated 4 months ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 4 months ago
• Wang-lab-UCSD / RESP
  The code used to generate the results from Parkinson / Hard et al. 2022
  ☆17Updated this week
• jsunn-y / DeCOIL
  A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library
  ☆14Updated 2 months ago
• eva-smorodina / antibody_developability
  ☆9Updated 2 years ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆29Updated last year
• microsoft / protnote
  ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…
  ☆36Updated last week
• brennanaba / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆13Updated last year
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆68Updated 2 years ago