tanaes / opentrons_functions

Related projects ⓘ

Alternatives and complementary repositories for opentrons_functions

• tanaes / Moeller_Opentrons_protocol_library
  ☆14Updated 2 years ago
• tyhho / OT-2_3D_Designs
  3D Designs to be used with OT-2
  ☆16Updated 3 years ago
• klamt-lab / straindesign
  StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy
  ☆39Updated last month
• jclachance / BOFdat
  Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data
  ☆26Updated last year
• SystemsBioinformatics / cbmpy
  CBMPy is a Python based platform for constraint based modelling and analysis.
  ☆18Updated 6 months ago
• mmcguffi / pLannotate
  Webserver and command line tool for annotating engineered plasmids
  ☆108Updated 7 months ago
• cnapy-org / CNApy
  An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced feat…
  ☆46Updated this week
• SBRG / bigg_models
  The BiGG Models website server
  ☆80Updated 5 years ago
• Edinburgh-Genome-Foundry / DnaCauldron
  Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
  ☆51Updated last year
• Edinburgh-Genome-Foundry / Plateo
  🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more
  ☆41Updated last month
• Bioprotocols / labop
  Laboratory Open Protocol (LabOP) Language
  ☆40Updated last month
• opencobra / memote
  memote – the genome-scale metabolic model test suite
  ☆128Updated 10 months ago
• pstjohn / d3flux
  D3.js based visualizations of cobrapy metabolic models
  ☆41Updated 4 years ago
• ginkgobioworks / geckopy
  Enzyme-constrained genome-scale models in python
  ☆25Updated last year
• barricklab / pLannotate
  Webserver and command line tool for annotating engineered plasmids
  ☆12Updated last month
• SysBioChalmers / RAVEN
  The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.
  ☆101Updated last week
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆30Updated last year
• cdanielmachado / reframed
  ReFramed: metabolic modeling package
  ☆56Updated 3 months ago
• jbloomlab / dms_tools2
  software for the analysis and visualization of deep mutational scanning data
  ☆32Updated 2 years ago
• segrelab / comets
  Computation of Microbial Ecosystems in Time and Space
  ☆19Updated 2 weeks ago
• OrensteinLab / DeCoDe
  Degenerate Codon Design
  ☆13Updated 4 years ago
• hsalis / SalisLabCode
  Models, design algorithms, and other software related to Salis lab publications
  ☆24Updated 2 weeks ago
• yachielab / QUEEN
  QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources
  ☆38Updated this week
• micom-dev / micom
  Python package to study microbial communities using metabolic modeling.
  ☆94Updated this week
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆65Updated last week
• SysBioChalmers / Human-GEM
  The generic genome-scale metabolic model of Homo sapiens
  ☆98Updated last week
• SynBioDex / pySBOL3
  Native python implementation of SBOL 3.0 specification
  ☆37Updated 7 months ago
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆40Updated 2 years ago
• hiyama341 / teemi
  teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …
  ☆37Updated 3 weeks ago
• IsaacLuo / SnapGeneFileReader
  A Python project to read and write Snapgene *.dna into dict, json, and biopython object.
  ☆36Updated 4 years ago