immunomethylomics / FlowSorted.BloodExtended.EPICLinks
A new extended cell deconvolution for peripheral blood
☆18Updated 11 months ago
Alternatives and similar repositories for FlowSorted.BloodExtended.EPIC
Users that are interested in FlowSorted.BloodExtended.EPIC are comparing it to the libraries listed below
Sorting:
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Updated 3 months ago
- Find causal cell-types underlying complex trait genetics☆92Updated 2 weeks ago
- ☆55Updated last week
- CELLECT (CELL-type Expression-specific integration for Complex Traits)☆92Updated last year
- ☆26Updated 4 months ago
- Unified access to several second-generation deconvolution methods☆91Updated last month
- Meta-analysis of genomewide association scans☆63Updated last year
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆94Updated last month
- A novel unsupervised batch removal framework, called iMAP, based on neural networks.☆35Updated 4 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- ☆90Updated 6 months ago
- ☆61Updated 4 years ago
- ☆59Updated 5 years ago
- Easily download publicly available GWAS summary statistics.☆78Updated 2 years ago
- DNA methylation-based clocks☆51Updated 2 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆53Updated 6 months ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆29Updated last year
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆129Updated last year
- Predictive models and analysis of cancer prognosis and drug response using primary tumor microbial abundances derived from WGS and RNA-se…☆18Updated last year
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆82Updated 9 months ago
- CELLEX (CELL-type EXpression-specificity)☆43Updated 2 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆93Updated last year
- Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)☆34Updated 3 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆68Updated 2 years ago
- AUCell: score single cells with gene regulatory networks☆183Updated last year
- ☆32Updated 4 years ago
- Updated implementation of the GSEA-P R application for modern R distributions☆100Updated 4 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆48Updated 2 years ago
- ☆48Updated 3 months ago
- ☆85Updated last year