Fast and accurate prediction of coiled coil domains in protein sequences.
☆27Dec 17, 2023Updated 2 years ago
Alternatives and similar repositories for DeepCoil
Users that are interested in DeepCoil are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CLANS_2 is a Python-based program for clustering sequences in the 2D or 3D space, based on their sequence similarities. CLANS visualizes …☆28Dec 5, 2024Updated last year
- Deep learning based prediction of pi-helices in protein sequences☆11Mar 24, 2023Updated 3 years ago
- Python package to manage protein structures and their annotations☆46Mar 18, 2026Updated 7 months ago
- ☆10Apr 12, 2023Updated 3 years ago
- Detection of remote homology by comparison of protein language model representations☆66Oct 22, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SPOT-1D-LM: Reaching Alignment-profile-based Accuracy in Predicting Protein Secondary and Tertiary Structural Properties without Alignmen…☆11Feb 1, 2024Updated 2 years ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Oct 25, 2021Updated 5 years ago
- programs and scripts for molecular structure analysis☆13Mar 26, 2026Updated 7 months ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆18Jan 14, 2025Updated last year
- ☆12Mar 12, 2026Updated 7 months ago
- Pipeline for exploring protein families using homology based or vector representation based methods to generate clusters in sequence spac…☆18Jul 27, 2026Updated 3 months ago
- ☆28Feb 27, 2023Updated 3 years ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆19May 6, 2019Updated 7 years ago
- Contact map alignment☆16May 10, 2018Updated 8 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Predict protein local properties using sequence or profile information.☆23Nov 16, 2020Updated 5 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆76Dec 28, 2020Updated 5 years ago
- A Light-Weight And Interpretable Molecular Docking Model☆26Oct 23, 2024Updated 2 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆61Nov 26, 2024Updated last year
- Scoring alignments by embedding vector similarity☆15Jul 17, 2026Updated 3 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆37Nov 18, 2023Updated 2 years ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated 2 years ago
- Cryptic pocket prediction using AlphaFold 2☆25Nov 27, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Pipelines for processing malaria parasite and mosquito genome sequence data.☆15Nov 2, 2024Updated last year
- Deep Learning tool trained on protein sequence embeddings from protein language models to accurately detect remote homologues for CATH su…☆14Jun 22, 2022Updated 4 years ago
- ☆11Feb 16, 2021Updated 5 years ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆10Aug 4, 2020Updated 6 years ago
- Guidelines on basic usage of Compute Canada's supercomputer resources☆13Jan 31, 2022Updated 4 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Jan 30, 2019Updated 7 years ago
- get full paper names for downloaded publications automatically☆22Feb 23, 2023Updated 3 years ago
- AI4SocialGood Final Project☆14Sep 8, 2018Updated 8 years ago
- Identifying amino acids important to AlphaFold!☆11Oct 20, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆67Sep 30, 2020Updated 6 years ago
- Experiments in protein folding through language modeling☆10Dec 10, 2021Updated 4 years ago
- Bayesian Information Gap Decision Theory☆20Sep 9, 2026Updated last month
- Freelance bioinformaticians directory☆11Feb 10, 2023Updated 3 years ago
- Nextflow pipeline designed for rapid onsite QC and variant calling of Oxford Nanopore data (following basecalling and demultiplexing with…☆13Jun 4, 2026Updated 4 months ago
- a pipeline to cluster proteins into families☆10Apr 1, 2020Updated 6 years ago
- Repository for working on the Reproducibility project☆12Jul 27, 2016Updated 10 years ago