isambard-uob / isambardLinks
Intelligent System for Analysis, Model Building And Rational Design of biomolecules.
☆25Updated 4 years ago
Alternatives and similar repositories for isambard
Users that are interested in isambard are comparing it to the libraries listed below
Sorting:
- PyDock Tutorial☆33Updated 7 years ago
- Interactive Python notebooks for PDBe API training☆56Updated this week
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 3 years ago
- ☆33Updated last year
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆82Updated 6 months ago
- Protein and nucleic acid validation service☆86Updated last year
- Protein Structure Analysis☆55Updated 2 months ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆111Updated last year
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆92Updated 3 months ago
- Software for biomolecular electrostatics and solvation calculations☆107Updated last year
- C-library for calculating Solvent Accessible Surface Areas☆156Updated 2 months ago
- Python interface for the RCSB PDB search API.☆65Updated 5 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆81Updated 2 weeks ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆76Updated last year
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆161Updated last month
- ☆86Updated 11 months ago
- A simple Python library to generate model peptides☆87Updated 4 years ago
- ☆85Updated 2 weeks ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆58Updated 6 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- Predict the binding affinity of protein-protein complexes from structural data☆146Updated 2 weeks ago
- Set of useful HADDOCK utility scripts☆54Updated last week
- scripts and facilities for in-silico mutagenesis with FoldX☆59Updated 2 months ago
- Source code and examples for AlphaFold Unmasked☆73Updated 4 months ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆128Updated 2 years ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆96Updated 5 months ago
- ☆52Updated last month
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆96Updated 2 years ago
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files☆178Updated 5 years ago