khughitt / labnote
A light-weight HTML lab notebook generator
☆18Updated last year
Alternatives and similar repositories for labnote:
Users that are interested in labnote are comparing it to the libraries listed below
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- A python script used to annotate genomic intervals.☆18Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 8 months ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A tool for Read Multi-Mapper Resolution☆23Updated 8 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 3 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- Library of snakemake rules.☆12Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 10 months ago
- ClusterScan, search for clusters of features in a given annotation.☆11Updated 3 years ago
- Enriched Domain Detector for ChIP-seq data☆16Updated 2 years ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 5 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- A R Bioconductor package for accessing MyGene.info services☆11Updated 6 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12Updated 11 months ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 4 months ago
- Simplifies parallel processing of DNA sequencing reads☆9Updated 6 months ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 5 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- Class materials for the NIH HPC snakemake class☆16Updated 6 months ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- Interactive table from gemini output☆10Updated 6 years ago