Alternatives and similar repositories for DeePhase

Users that are interested in DeePhase are comparing it to the libraries listed below

• piercelab / tcrmodel2
  ☆40Updated last month
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆38Updated 2 months ago
• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆26Updated 2 years ago
• lehner-lab / doubledeepms
  Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…
  ☆19Updated last year
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆55Updated last year
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• Guido497 / phase-separation
  ☆15Updated 3 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated last year
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆32Updated last year
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆28Updated 2 weeks ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆39Updated 3 years ago
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆21Updated 8 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆30Updated last year
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆26Updated last year
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆34Updated last month
• gzBiomedical / EpiScan
  Antibody-Specific Epitope Mapping
  ☆12Updated 6 months ago
• enai4bio / DeepAAI
  DeepAAI
  ☆31Updated 4 months ago
• tymor22 / tm-vec
  ☆68Updated 7 months ago
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆33Updated last month
• YihePang / DisoFLAG
  Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model
  ☆20Updated 8 months ago
• Wang-Lin-boop / PPI-Miner
  A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design
  ☆18Updated 3 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆84Updated last year
• lyjps / Struct2GO
  Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information
  ☆27Updated last year
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆44Updated 4 months ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆37Updated last year
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆48Updated 6 months ago
• AbSciBio / igdesign
  ☆38Updated 4 months ago
• csi-greifflab / developability_profiling
  ☆21Updated 4 months ago
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆15Updated 4 years ago