Alternatives and similar repositories for RaMP-DB:

Users that are interested in RaMP-DB are comparing it to the libraries listed below

• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆33Updated 3 years ago
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆40Updated last month
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆27Updated last week
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆23Updated 3 months ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 7 months ago
• pnnl / leapR
  ☆17Updated 3 months ago
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆49Updated last year
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆27Updated last year
• Vitek-Lab / MSstatsTMT
  R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …
  ☆28Updated last week
• kentsisresearchgroup / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆26Updated 6 years ago
• MRCIEU / metaboprep
  a pipeline of metabolomics data processing and quality control
  ☆25Updated last year
• broadinstitute / protigy
  Proteomics Toolset for Integrative Data Analysis
  ☆22Updated last year
• jpquast / protti
  Picotti lab data analysis package.
  ☆62Updated last week
• ComputationalProteomics / NormalyzerDE
  Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.
  ☆22Updated 4 months ago
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated last year
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆29Updated 7 months ago
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆44Updated this week
• lgatto / RforProteomics
  Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
  ☆90Updated last year
• ahmohamed / lipidr
  Data Mining and Analysis of Lipidomics datasets in R
  ☆29Updated last year
• Vitek-Lab / MSstats
  R package - MSstats
  ☆80Updated last week
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆9Updated 3 years ago
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆19Updated last month
• jaspershen / metID
  Construct database and identify metabolites.
  ☆5Updated 2 years ago
• broadinstitute / PANOPLY
  Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…
  ☆34Updated last month
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆44Updated last month
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆59Updated this week
• RASpicer / MetabolomicsTools
  ☆55Updated 3 years ago
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆21Updated 4 years ago
• IFIproteomics / LFQbench
  ☆24Updated 2 years ago