ecnuzdd / PhosMap
A Comprehensive R Package For Analyzing Quantitative Phosphoproteomics Data
☆12Updated 2 years ago
Alternatives and similar repositories for PhosMap:
Users that are interested in PhosMap are comparing it to the libraries listed below
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆59Updated 2 weeks ago
- PhosR is a package for the comprehensive analysis of phosphoproteomic data.☆15Updated 4 months ago
- R package for analysing proteomics data☆49Updated last year
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆49Updated 5 years ago
- tidymass☆54Updated last year
- Code related to the Celligner manuscript☆46Updated 4 years ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆22Updated 6 years ago
- A tool for large scale omics datasets evaluation☆24Updated last year
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- An r package for proteomics data Analysis, developed from DEP.☆29Updated last week
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆43Updated 3 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- R package for the analysis of single-cell immune repertoires☆42Updated last month
- Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.☆21Updated 2 years ago
- ☆61Updated 8 months ago
- An S3 data object and framework for common quantitative proteomic analyses☆40Updated 2 months ago
- Bayesian network plot for the enrichment analysis results☆64Updated 5 months ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆80Updated last year
- DEqMS is a tool for quantitative proteomic analysis☆23Updated 3 months ago
- ☆18Updated 3 years ago
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.☆40Updated 4 months ago
- DEP package☆28Updated 2 years ago
- Proteomics Toolset for Integrative Data Analysis☆22Updated last year
- ☆29Updated 4 months ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆34Updated this week
- ☆47Updated 2 years ago
- Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data☆26Updated 10 months ago
- Immunology-related bioinformatics data and tools☆72Updated 10 months ago
- MeSH Enrichment and Semantic analyses☆12Updated 4 months ago