Microbiome Classifier Pipeline for Pacific Biosciences 16s Data
☆11Jan 22, 2024Updated 2 years ago
Alternatives and similar repositories for mcsmrt
Users that are interested in mcsmrt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 16S rRNA database☆13Nov 29, 2018Updated 7 years ago
- ☆18Apr 17, 2025Updated last year
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 3 years ago
- Deep neural network based prediction model for gene essentiality prediction in microbes☆10Feb 11, 2021Updated 5 years ago
- Repository with materials for the Speeding Up Science Workshops at UC Davis☆10Oct 31, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Variant Calling and Postfiltering☆11Jan 9, 2017Updated 9 years ago
- Automated pipeline for whole bacterial genome analysis based on snakemake☆12May 16, 2022Updated 4 years ago
- Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-☆34Sep 20, 2019Updated 6 years ago
- repo for cicese metatranscriptomics workshop, nov 2018☆14Jan 22, 2020Updated 6 years ago
- 解构R语言中的“黑魔法”☆17Jun 11, 2015Updated 11 years ago
- Tools to Configure Proxy Interactively☆16Oct 6, 2019Updated 6 years ago
- An automated assembly pipeline for microbial genomes☆19Jun 9, 2026Updated last week
- metaX: a flexible and comprehensive software for processing omics data.☆27Jun 16, 2023Updated 3 years ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Feb 12, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Editable DT tables as shiny inputs and passed as reactives☆12Feb 28, 2019Updated 7 years ago
- Provides a simplified method for bringing tidy data into R from KISTERS WISKI databases via KiWIS API.☆13Oct 11, 2024Updated last year
- R interface to GenBank/GenPept files☆14Jan 12, 2021Updated 5 years ago
- A model-based visualization method for microbiome data☆16Oct 27, 2025Updated 7 months ago
- ☆16Apr 26, 2019Updated 7 years ago
- ☆17Sep 20, 2019Updated 6 years ago
- Read nanopore sequence reads in real-time☆14Feb 9, 2017Updated 9 years ago
- 📊 An R package of RNA-seq workflow☆16May 4, 2022Updated 4 years ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Feb 23, 2026Updated 3 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut☆36Dec 4, 2023Updated 2 years ago
- k-SLAM ultra fast alignment and taxonomic classification of metagenomic datasets☆23Nov 18, 2018Updated 7 years ago
- 🧮 🔢 Generate multi-sample k-mer count matrix from WGS☆11Jan 17, 2026Updated 4 months ago
- Protein-ligand binding sites prediction toolkits