☆12Oct 28, 2021Updated 4 years ago
Alternatives and similar repositories for qiime2-to-BugBase
Users that are interested in qiime2-to-BugBase are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Dec 28, 2019Updated 6 years ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆17Mar 31, 2022Updated 4 years ago
- ☆14Dec 2, 2024Updated last year
- ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test☆15Mar 7, 2019Updated 7 years ago
- ☆15Mar 14, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code, unit tests, and tutorials for running PICRUSt2☆396Nov 27, 2025Updated 8 months ago
- ☆24May 6, 2020Updated 6 years ago
- Code and Docs that Respect People☆11Dec 8, 2018Updated 7 years ago
- Repo for course Tools for complex data analysis☆11Jul 15, 2024Updated 2 years ago
- Snakemake pipeline calculating KEGG orthologue abundance in metagenomic sequence data.☆26Feb 14, 2026Updated 6 months ago
- Example code from metagenomics book (https://www.gitbook.com/book/kyclark/metagenomics/details)☆18Feb 1, 2019Updated 7 years ago
- Snakemake workflow for comparison of differential abundance ranks☆13Mar 22, 2024Updated 2 years ago
- A short tutorial for Tax4Fun2☆27Aug 24, 2024Updated last year
- Identifying misassemblies via deep learning☆11May 1, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆44Nov 20, 2017Updated 8 years ago
- R and python scripts for correlation-based network analysis☆61May 17, 2020Updated 6 years ago
- A simple hexo theme with good performance on different devices.☆12Apr 10, 2026Updated 4 months ago
- A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.☆462Feb 13, 2026Updated 6 months ago
- A QIIME 2 implementation of SMURF☆13Apr 27, 2022Updated 4 years ago
- ☆14Jul 21, 2026Updated 3 weeks ago
- A list of R environment based tools for microbiome data exploration, statistical analysis and visualization☆118Apr 11, 2023Updated 3 years ago
- Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data☆146Jul 17, 2026Updated last month
- Import qiime2 artifacts to R☆185Dec 12, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R package to predict microbial loads☆20Updated this week
- mLDM: a new hierarchical Bayesian statistical model for sparse microbial association discovery☆11Oct 18, 2016Updated 9 years ago
- ☆25Feb 2, 2021Updated 5 years ago
- ☆91May 22, 2024Updated 2 years ago
- From metagenomes to epitopes and beyond☆12Jul 27, 2026Updated 3 weeks ago
- ☆14Apr 4, 2023Updated 3 years ago
- An R package for the Monte Carlo simulation of sequence evolution☆19May 6, 2014Updated 12 years ago
- ANnotation-based ANalysis of Specific Interactions☆10Jul 20, 2026Updated 3 weeks ago
- statdivlab's teaching materials for STAMPS @ the MBL in 2019☆11Jul 28, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆23Aug 1, 2024Updated 2 years ago
- Case-control matching for microbiome data☆10Aug 8, 2023Updated 3 years ago
- ☆20Jun 8, 2020Updated 6 years ago
- ☆18Nov 27, 2022Updated 3 years ago
- ☆11Oct 8, 2018Updated 7 years ago
- ☆61Nov 7, 2019Updated 6 years ago
- ☆12Mar 29, 2025Updated last year