MRCIEU / epigraphdb-pqtl
This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.
☆38Updated 3 years ago
Alternatives and similar repositories for epigraphdb-pqtl
Users that are interested in epigraphdb-pqtl are comparing it to the libraries listed below
Sorting:
- An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…☆33Updated 2 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆26Updated 6 months ago
- An R package for Mendelian Randomization☆37Updated last year
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆32Updated 3 months ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆26Updated last year
- Analysis code for Olink CVD1 - HF analysis☆12Updated 8 months ago
- Pair-wise conditional analysis and colocalisation☆41Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆24Updated this week
- ☆22Updated 2 years ago
- MVMR R Package☆47Updated last week
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆48Updated 4 years ago
- Tutorial for running Mendelian Randomization analysis using R☆33Updated last year
- Data objects for various sets of instruments☆44Updated 4 years ago
- Codes for our NPNT paper at Nature Metabolism☆16Updated last year
- This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package☆45Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆53Updated last year
- This code relates to the project titled "Assessing the causal role of epigenetic clocks in the development of multiple cancers: a Mendeli…☆14Updated 3 years ago
- ☆52Updated last year
- R package for performing Mendelian Randomization using mixture models☆24Updated 5 years ago
- Connecting GWAS summary data to analytical tools☆21Updated last year
- ☆17Updated 8 months ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆33Updated 3 years ago
- R package for CAUSE☆55Updated last year
- R package that contains plink binaries for windows, mac and linux☆10Updated 5 years ago
- This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…☆16Updated 10 months ago
- ☆23Updated 4 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆31Updated last year
- The effect of metabolic traits on oral and oropharyngeal cancer risk: a Mendelian randomization analysis☆12Updated 2 years ago