MRCIEU / epigraphdb-pqtl
This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.
☆39Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for epigraphdb-pqtl
- An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…☆33Updated 2 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆20Updated last month
- Pair-wise conditional analysis and colocalisation☆37Updated 6 months ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆28Updated 3 months ago
- An R package for Mendelian Randomization☆36Updated 7 months ago
- pQTL tools☆18Updated this week
- ☆20Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆17Updated 10 months ago
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆24Updated last year
- Data objects for various sets of instruments☆43Updated 4 years ago
- LD Score Regression in R☆38Updated last year
- Analysis code for Olink CVD1 - HF analysis☆12Updated 3 months ago
- ☆52Updated 9 months ago
- Mendelian Randomization Bayesian Model Averaging☆21Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆47Updated 7 months ago
- R package for CAUSE☆53Updated 10 months ago
- this repository contains the code (not the data and the results) to reproduce the paper : Impact of the gut microbiota and associated met…☆12Updated 2 years ago
- ☆20Updated 3 years ago
- This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package☆44Updated 7 months ago
- Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics☆42Updated 5 months ago
- MVMR R Package☆43Updated 3 weeks ago
- Connecting GWAS summary data to analytical tools☆19Updated 7 months ago
- R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples☆52Updated last year
- Pair-wise enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆18Updated this week
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆33Updated 2 years ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆83Updated last year
- ☆37Updated 2 years ago
- R interface to the IEU GWAS database API☆76Updated 3 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆40Updated 3 years ago