jbloomlab / SARS-CoV-2-RBD_DMSLinks
Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
☆46Updated 3 years ago
Alternatives and similar repositories for SARS-CoV-2-RBD_DMS
Users that are interested in SARS-CoV-2-RBD_DMS are comparing it to the libraries listed below
Sorting:
- Evolutionary velocity with protein language models☆95Updated 2 months ago
- ColabFold protocol☆56Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆63Updated 10 months ago
- Mutation effects predicted from sequence co-variation☆72Updated 8 years ago
- Code repository of "Deep generative design of RNA family sequences"☆40Updated 2 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- ☆33Updated last year
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆78Updated 5 months ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆55Updated 9 months ago
- ☆36Updated last year
- Fast protein structure searching or your money back☆118Updated 3 weeks ago
- Fast and accurate protein structure prediction☆57Updated last year
- Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"☆70Updated 2 years ago
- ☆76Updated last year
- ☆39Updated 7 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆33Updated 2 years ago
- Direct coupling analysis software for protein and RNA sequences☆58Updated 6 months ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 3 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 5 months ago
- ☆47Updated last year
- ☆79Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆66Updated last month
- Graph Network for protein-protein interface including language model features☆34Updated last year
- RNA Multiple Sequence Alignment☆47Updated 2 years ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆79Updated 5 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated 2 years ago
- Tools for annotation, processing and ML for antibody sequences☆39Updated this week
- ☆23Updated 2 years ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 10 months ago