jbloomlab / SARS-CoV-2-RBD_DMS
Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
☆44Updated 3 years ago
Alternatives and similar repositories for SARS-CoV-2-RBD_DMS:
Users that are interested in SARS-CoV-2-RBD_DMS are comparing it to the libraries listed below
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆58Updated 4 years ago
- Evolutionary velocity with protein language models☆90Updated last year
- Mutation effects predicted from sequence co-variation☆64Updated 7 years ago
- ☆67Updated 6 months ago
- ☆36Updated 3 months ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 4 months ago
- ☆72Updated last year
- ☆35Updated 6 months ago
- ColabFold protocol☆50Updated 6 months ago
- A domain parser for Alphafold models☆34Updated last year
- ☆37Updated 6 months ago
- ☆49Updated 2 weeks ago
- ☆26Updated 10 months ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆44Updated last week
- Repository for Protein-Vec, a protein embedding mixture of experts model☆37Updated last year
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆31Updated last month
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 2 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆53Updated 2 weeks ago
- Learning the language of protein-protein interactions☆64Updated 3 weeks ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆83Updated last year
- ☆24Updated last year
- Neural networks for deep mutational scanning data☆68Updated 5 months ago
- Code repository of "Deep generative design of RNA family sequences"☆33Updated 9 months ago
- Evolutionary conservation estimation of residues or nucleotides☆38Updated 3 years ago
- ☆22Updated last year
- ☆35Updated last year
- Fast and accurate protein structure prediction☆51Updated 3 months ago
- Predict the structure of immune receptor proteins☆48Updated 5 months ago
- ☆39Updated 3 years ago