jbloomlab / SARS-CoV-2-RBD_DMSLinks
Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
☆46Updated 3 years ago
Alternatives and similar repositories for SARS-CoV-2-RBD_DMS
Users that are interested in SARS-CoV-2-RBD_DMS are comparing it to the libraries listed below
Sorting:
- Evolutionary velocity with protein language models☆95Updated last month
- Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"☆69Updated 2 years ago
- ColabFold protocol☆57Updated last year
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆61Updated 9 months ago
- Code repository of "Deep generative design of RNA family sequences"☆40Updated last month
- ☆36Updated 11 months ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆55Updated 8 months ago
- ☆76Updated last year
- Fast protein structure searching or your money back☆118Updated 2 months ago
- ☆32Updated last year
- Detection of remote homology by comparison of protein language model representations☆60Updated last year
- Fast and accurate protein structure prediction☆56Updated 11 months ago
- ☆37Updated 6 months ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆77Updated 4 months ago
- Geometric deep learning of protein–DNA binding specificity☆77Updated 9 months ago
- Direct coupling analysis software for protein and RNA sequences☆53Updated 5 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆109Updated last month
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆77Updated 4 months ago
- ☆25Updated 2 years ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated 2 years ago
- ☆39Updated 4 years ago
- ☆76Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆32Updated 2 years ago
- Ultra-fast in-silico structure mutation☆36Updated 9 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 5 months ago
- A domain parser for Alphafold models☆46Updated 2 years ago