Alternatives and similar repositories for Pfeature:

Users that are interested in Pfeature are comparing it to the libraries listed below

• jcheongs / alphafold-multimer
  ☆27Updated 2 years ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆54Updated 2 years ago
• Devil625 / Codon_Optimization
  https://www.nature.com/articles/s41598-020-74091-z#Tab1
  ☆40Updated 10 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆79Updated 10 months ago
• zswitten / Antimicrobial-Peptides
  Collecting AMP MIC data from different sources, then running a GAN to output promising sequences
  ☆66Updated 5 months ago
• Wang-Lin-boop / GetPDB
  Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…
  ☆40Updated 6 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆79Updated 4 months ago
• AlexanderKroll / KM_prediction
  ☆32Updated 2 years ago
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆29Updated last year
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆79Updated 6 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 7 months ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆120Updated last month
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆101Updated 3 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated 5 months ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆39Updated last year
• realbigws / RaptorX_Property_Fast
  RaptorX-Property: a Standalone Package for Protein Structure Property Prediction
  ☆15Updated 5 years ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆50Updated 9 months ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated last month
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆50Updated 2 months ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆62Updated 7 years ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆93Updated this week
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆76Updated 3 weeks ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆134Updated 3 months ago
• weizhongli / cdhit-web-server
  ☆18Updated 2 years ago
• tadorfer / protlearn
  A Python package for extracting protein sequence features
  ☆58Updated 2 years ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆105Updated last year
• sarisabban / RosettaDesign
  RosettaDesign using PyRosetta
  ☆30Updated 5 years ago
• amirpandi / Deep_AMP
  Generator and regressor neural networks for antimicrobial peptides
  ☆21Updated last year
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆71Updated 5 months ago
• BioGenies / peptide-prediction-list
  Collects software dedicated to predicting specific properties of peptides
  ☆52Updated last month