usnistgov / Lineage-MapperLinks
Lineage Mapper Fiji plugin and MATLAB source code
☆19Updated 3 years ago
Alternatives and similar repositories for Lineage-Mapper
Users that are interested in Lineage-Mapper are comparing it to the libraries listed below
Sorting:
- AICS Segmentation (One-Way) Mirror☆45Updated 5 years ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Updated 5 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 5 months ago
- simple package for augmentation of n-dimensional arrays☆34Updated 2 years ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Advanced Tool for Labeling And Segmentation☆39Updated last year
- ☆32Updated 5 months ago
- PSFj - Know your microscope fluorescence☆23Updated 5 years ago
- ☆18Updated 2 years ago
- Deep convolutional neural networks for biological motion analysis☆14Updated 6 years ago
- ☆31Updated 4 years ago
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago
- A python algorithm for tracking cells in 3D deforming organs☆66Updated last month
- Quantitative analysis of cell motility behaviors☆13Updated 10 months ago
- ☆24Updated 5 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 3 years ago
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆19Updated 6 months ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 3 months ago
- Process images using SimpleITK in napari☆23Updated 8 months ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 4 years ago
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago
- TensorFlow Deconvolution for Microscopy Data☆91Updated 3 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Updated 5 years ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆90Updated 3 years ago
- Notebooks for VoidSeg☆17Updated 5 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 8 months ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆136Updated 5 years ago