usnistgov / Lineage-MapperLinks
Lineage Mapper Fiji plugin and MATLAB source code
☆18Updated 3 years ago
Alternatives and similar repositories for Lineage-Mapper
Users that are interested in Lineage-Mapper are comparing it to the libraries listed below
Sorting:
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 10 months ago
- Quantitative analysis of cell motility behaviors☆13Updated 6 months ago
- ☆32Updated last month
- ☆25Updated 5 years ago
- ☆18Updated 2 years ago
- Deep convolutional neural networks for biological motion analysis☆14Updated 6 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 2 months ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆55Updated 10 months ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Updated 5 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 3 years ago
- A python algorithm for tracking cells in 3D time lapse images.☆61Updated last week
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated last month
- Cloud-based data annotation tools for biological images☆81Updated last year
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 5 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆68Updated 11 months ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆90Updated 2 years ago
- simple package for augmentation of n-dimensional arrays☆33Updated 2 years ago
- Cell tracker designed for tracking intestinal organoids☆26Updated last week
- Python scripts for tracking cells in fluorescent microscopy.☆11Updated 7 years ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 3 years ago
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆44Updated 4 months ago
- Notebooks for VoidSeg☆17Updated 5 years ago
- ☆24Updated 2 years ago
- U-net based segmentation of nuclei in microscopy images☆52Updated 7 years ago
- Track cells and build cell lineages☆35Updated last year
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago