usnistgov / Lineage-Mapper
Lineage Mapper Fiji plugin and MATLAB source code
☆18Updated 2 years ago
Related projects: ⓘ
- ☆25Updated 4 years ago
- AICS Segmentation (One-Way) Mirror☆44Updated 3 years ago
- AICS ML Segmentation (One-Way) Mirror☆26Updated 3 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 2 years ago
- ☆29Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆51Updated last year
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- Smooth 2D manifold extraction from 3D image stack☆21Updated 6 years ago
- Notebooks for VoidSeg☆16Updated 4 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆47Updated last week
- Track and lineage visualization with btrack and Napari☆43Updated 11 months ago
- Analysis of results of the Data Science Bowl 2018☆20Updated 4 years ago
- Python scripts for tracking cells in fluorescent microscopy.☆11Updated 6 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆65Updated 3 months ago
- Distributed segmentation for bio-image-analysis☆35Updated 2 months ago
- ☆12Updated 3 years ago
- python tools for BigDataViewer☆21Updated last year
- The repository of NEUBIAS textbook 2021☆9Updated 2 years ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆30Updated 3 weeks ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆52Updated 4 years ago
- imaging demos☆10Updated last year
- A general illumination correction method for optical microscopy.☆37Updated 3 years ago
- Deep convolutional neural networks for biological motion analysis☆14Updated 5 years ago
- 3D virtual staining with 2D and 2.5D U-Nets☆27Updated last year
- AnnotatorJ: ImageJ plugin for object annotation in 2D☆22Updated 3 years ago
- ☆16Updated last year
- Track cells and build cell lineages☆27Updated last month
- Advanced Tool for Labeling And Segmentation☆33Updated 3 weeks ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated last week
- OME-TIFF IO in python☆18Updated 2 weeks ago