Alternatives and similar repositories for onconpc:

Users that are interested in onconpc are comparing it to the libraries listed below

• cclab-brca / neoadjuvant-therapy-response-predictor
  ☆54Updated 2 years ago
• suinleelab / deepprofile-study
  Code for paper "A deep profile of gene expression across 18 human cancers"
  ☆20Updated 3 months ago
• ShenLab-Genomics / SpliceTransformer
  SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence
  ☆20Updated 4 months ago
• lanagarmire / DeepProg
  Deep-Learning framework for multi-omic and survival data integration
  ☆80Updated last year
• ICGC-TCGA-PanCancer / TumorType-WGS
  Classifying tumor types based on Whole Genome Sequencing (WGS) data
  ☆48Updated last year
• RasmussenLab / MOVE
  MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
  ☆75Updated 5 months ago
• SmritiChawla / Precily
  ☆30Updated 2 years ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆53Updated 8 months ago
• Lifoof / MoGCN
  Multi-omics integration method using AE and GCN
  ☆34Updated last year
• lanagarmire / Asgard
  ☆41Updated last year
• Hua0113 / DCAP
  DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis
  ☆21Updated 4 years ago
• PayneLab / cptac
  Python packaging for CPTAC data
  ☆94Updated 9 months ago
• SBIlab / NetBio
  ☆34Updated 2 years ago
• micrisor / NAT-ML
  ☆34Updated 3 years ago
• snap-stanford / KGWAS
  KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph
  ☆58Updated 3 weeks ago
• ruppinlab / PERCEPTION
  Utilizing single-cell omics from patients tumor to predict response and resistance.
  ☆63Updated last year
• mdozmorov / TCGAsurvival
  Scripts to analyze TCGA data
  ☆120Updated last year
• clinicalml / sc-foundation-eval
  Code for evaluating single cell foundation models scBERT and scGPT
  ☆40Updated 7 months ago
• JianYang-Lab / MeDuSA
  MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…
  ☆43Updated last month
• mdozmorov / Immuno_notes
  Immunology-related bioinformatics data and tools
  ☆72Updated 11 months ago
• pathint / reoa
  Relative Expression Ordering Analysis (REOA) package
  ☆20Updated 2 years ago
• CMRI-ProCan / DeePathNet
  ☆10Updated 5 months ago
• broadinstitute / depmap_omics
  What you need to process the Quarterly DepMap-Omics releases from Terra
  ☆114Updated this week
• yjgeno / GenKI
  ☆14Updated 11 months ago
• poseidonchan / TAPE
  Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)
  ☆54Updated last year
• instadeepai / multiomics-open-research
  BulkRNABert: Cancer prognosis from bulk RNA-seq based language models
  ☆20Updated 8 months ago
• cantinilab / momix-notebook
  ☆65Updated last year
• TencentAILabHealthcare / scTranslator
  ☆36Updated 8 months ago
• hamidghaedi / Methylation_Analysis
  Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis
  ☆24Updated 11 months ago
• stat115 / Lab_2020
  Repository for all labs for STAT115 for 2020
  ☆49Updated 4 years ago