Clinical sequencing-based primary site classifier
☆38Feb 27, 2026Updated 2 months ago
Alternatives and similar repositories for onconpc
Users that are interested in onconpc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆17May 11, 2023Updated 2 years ago
- Tumor type classifier using cancer genomic panel sequencing data☆13Mar 12, 2024Updated 2 years ago
- Trying to train LoRAs for ESM-2☆13Aug 6, 2023Updated 2 years ago
- Ensemble learning for let truncated high dimensional survival data☆17Dec 8, 2020Updated 5 years ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆50Nov 20, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Crossmapped phenotype ontologies for the oncology domain☆14Mar 29, 2026Updated last month
- ☆11Jun 14, 2023Updated 2 years ago
- TabMap for high-performance tabular data analysis - Nature BME☆19Jan 8, 2025Updated last year
- R package for CRAG☆12Feb 17, 2025Updated last year
- ☆15Feb 28, 2025Updated last year
- Scripts for building computational models of gene regulation with tensorflow☆11Jan 21, 2020Updated 6 years ago
- Deep Learning course final project. 12th semester.☆17Apr 24, 2025Updated last year
- A python library for calculating semantic similarity between patients in N3C☆14Oct 5, 2022Updated 3 years ago
- This project consists of three parts: Random forest model for GC diagnosis and Predict the survival outcomes of GC patient using RSF meth…☆32Nov 15, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Mar 23, 2026Updated last month
- ☆16May 19, 2025Updated 11 months ago
- ☆37Oct 11, 2024Updated last year
- Rareservoir Database Tools☆16Mar 13, 2023Updated 3 years ago
- Simulation codes from "Beyond EPV" projects☆11Feb 17, 2020Updated 6 years ago
- ☆21Aug 30, 2022Updated 3 years ago
- Scripts used to produce the analysis in our paper on computable phenotypes for long-COVID☆18Sep 17, 2025Updated 7 months ago
- Powerful and robust non-parametric association testing for microbiome data via a zero-inflated quantile approach☆12Mar 21, 2024Updated 2 years ago
- A Mendelian approach to variant effect prediction built in keras☆20Nov 3, 2025Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆77Feb 24, 2025Updated last year
- Semi-automatic System Dynamics Model Conceptualization☆11May 14, 2020Updated 5 years ago
- Tutorial repository for the official MOTOR release☆14Feb 22, 2025Updated last year
- This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…☆19Jul 3, 2024Updated last year
- ☆34Jun 1, 2022Updated 3 years ago
- Tutorial of Writing R Packages a Modern Workflow for beginners☆14Feb 17, 2021Updated 5 years ago
- Easily Process a Batch of Cox Models☆23Jul 26, 2025Updated 9 months ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆13Apr 21, 2021Updated 5 years ago
- IMAge/enGINE is freely available software for rapid computation of high-dimensional quantitative medical imaging.☆13Jun 21, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆17Jun 14, 2023Updated 2 years ago
- Container class to represent genomic locations and support genomic analysis☆27Updated this week
- SAPLING: Suffix Array Piecewise Linear INdex for Genomics☆25Sep 1, 2020Updated 5 years ago
- mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes☆22Nov 13, 2025Updated 5 months ago
- Python Phenopacket Tools☆17Nov 3, 2025Updated 5 months ago
- ☆24Jan 25, 2024Updated 2 years ago
- Anatomy-aware self-supervised learning☆11Jun 22, 2024Updated last year