itmoon7 / onconpcLinks
Clinical sequencing-based primary site classifier
☆34Updated 11 months ago
Alternatives and similar repositories for onconpc
Users that are interested in onconpc are comparing it to the libraries listed below
Sorting:
- ☆55Updated 2 years ago
- Code for paper "A deep profile of gene expression across 18 human cancers"☆25Updated 6 months ago
- Deep-Learning framework for multi-omic and survival data integration☆82Updated last year
- Framework for Interpretable Neural Networks☆105Updated 3 months ago
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆25Updated 7 months ago
- This repository houses scripts for training genetic scores of omic traits in INTERVAL☆25Updated 2 years ago
- Repository for all labs for STAT115 for 2020☆50Updated 5 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆54Updated 11 months ago
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆80Updated 8 months ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆48Updated last year
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆69Updated 2 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆70Updated 3 months ago
- ☆34Updated 3 years ago
- Scripts to analyze TCGA data☆121Updated last year
- ☆42Updated 4 months ago
- ☆31Updated 2 years ago
- ☆43Updated last year
- Multi-omics integration method using AE and GCN☆35Updated 2 years ago
- ☆57Updated 4 months ago
- Pathformer: biological pathway informed transformer model☆31Updated last year
- Documentation and tutorials on using GCP for biomedical research☆31Updated last month
- A Transformer-based model for read-level DNA methylation pattern identification and tumour deconvolution☆33Updated 3 months ago
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆43Updated 4 months ago
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆152Updated 3 years ago
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆89Updated 4 years ago
- ☆66Updated last year
- ☆56Updated 2 weeks ago
- CpGPT: a Foundation Model for DNA Methylation.☆43Updated last week
- Python packaging for CPTAC data☆95Updated last year