Alternatives and similar repositories for onconpc:

Users that are interested in onconpc are comparing it to the libraries listed below

• suinleelab / deepprofile-study
  Code for paper "A deep profile of gene expression across 18 human cancers"
  ☆21Updated 4 months ago
• cclab-brca / neoadjuvant-therapy-response-predictor
  ☆54Updated 2 years ago
• instadeepai / multiomics-open-research
  BulkRNABert: Cancer prognosis from bulk RNA-seq based language models
  ☆21Updated 9 months ago
• ruppinlab / PERCEPTION
  Utilizing single-cell omics from patients tumor to predict response and resistance.
  ☆64Updated 2 years ago
• lanagarmire / DeepProg
  Deep-Learning framework for multi-omic and survival data integration
  ☆82Updated last year
• RasmussenLab / MOVE
  MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
  ☆76Updated 5 months ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆54Updated 9 months ago
• Lifoof / MoGCN
  Multi-omics integration method using AE and GCN
  ☆34Updated last year
• PayneLab / cptac
  Python packaging for CPTAC data
  ☆93Updated 10 months ago
• Hua0113 / DCAP
  DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis
  ☆21Updated 4 years ago
• stat115 / Lab_2020
  Repository for all labs for STAT115 for 2020
  ☆49Updated 5 years ago
• TencentAILabHealthcare / scTranslator
  ☆36Updated 8 months ago
• ICGC-TCGA-PanCancer / TumorType-WGS
  Classifying tumor types based on Whole Genome Sequencing (WGS) data
  ☆48Updated last year
• lanagarmire / Asgard
  ☆42Updated last year
• SBIlab / NetBio
  ☆34Updated 2 years ago
• ShenLab-Genomics / SpliceTransformer
  SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence
  ☆21Updated 5 months ago
• rahuldhodapkar / cell2sentence
  Create cell sentences from sequencing data
  ☆22Updated 8 months ago
• yjgeno / GenKI
  ☆14Updated last year
• marakeby / pnet_prostate_paper
  P-NET, Biologically informed deep neural network for prostate cancer classification and discovery
  ☆149Updated 3 years ago
• SmritiChawla / Precily
  ☆30Updated 2 years ago
• micrisor / NAT-ML
  ☆34Updated 3 years ago
• arnor-sigurdsson / EIR
  A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.
  ☆29Updated this week
• KrishnaswamyLab / SingleCellWorkshop
  ☆90Updated 4 years ago
• snap-stanford / KGWAS
  KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph
  ☆62Updated last month
• broadinstitute / depmap_omics
  What you need to process the Quarterly DepMap-Omics releases from Terra
  ☆115Updated this week
• SuperBianC / scMulan
  Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.
  ☆57Updated 10 months ago
• gevaertlab / sequoia-pub
  SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention
  ☆38Updated last month
• lulab / Pathformer
  Pathformer: biological pathway informed transformer model
  ☆28Updated last year
• LewisLabUCSD / Ligand-Receptor-Pairs
  Compendium of available lists of ligand-receptor pairs and surface-secreted protein interactions.
  ☆129Updated 2 years ago
• mdozmorov / TCGAsurvival
  Scripts to analyze TCGA data
  ☆120Updated last year