Clinical sequencing-based primary site classifier
☆38Feb 27, 2026Updated this week
Alternatives and similar repositories for onconpc
Users that are interested in onconpc are comparing it to the libraries listed below
Sorting:
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆18May 11, 2023Updated 2 years ago
- Tumor type classifier using cancer genomic panel sequencing data☆12Mar 12, 2024Updated last year
- Trying to train LoRAs for ESM-2☆12Aug 6, 2023Updated 2 years ago
- R package for CRAG☆12Feb 17, 2025Updated last year
- ☆11Jun 14, 2023Updated 2 years ago
- A deep learning framework for deubiquitnase-substrate interaction identification☆12Jul 31, 2025Updated 7 months ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆49Nov 20, 2023Updated 2 years ago
- ☆15Feb 28, 2025Updated last year
- TabMap for high-performance tabular data analysis - Nature BME☆19Jan 8, 2025Updated last year
- Quantifying copy number signatures from absolute copy number profiles☆27Jul 23, 2025Updated 7 months ago
- ☆35Oct 11, 2024Updated last year
- This project consists of three parts: Random forest model for GC diagnosis and Predict the survival outcomes of GC patient using RSF meth…☆31Nov 15, 2024Updated last year
- ☆75Feb 24, 2025Updated last year
- Easily Process a Batch of Cox Models☆23Jul 26, 2025Updated 7 months ago
- ☆34Jun 1, 2022Updated 3 years ago
- cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data☆76Aug 18, 2022Updated 3 years ago
- ☆31Mar 5, 2024Updated last year
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆77Updated this week
- Deep learning based prediction of pi-helices in protein sequences☆11Mar 24, 2023Updated 2 years ago
- we explores the fascinating domain of text-to-image generation using the powerful capabilities of the Flux API. The objective is to trans…☆12Aug 14, 2024Updated last year
- ☆10Jul 9, 2024Updated last year
- ☆11Sep 22, 2025Updated 5 months ago
- A Snakemake-based pipeline for gene mapping in Triticeae.☆11Mar 5, 2022Updated 3 years ago
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆11Apr 14, 2022Updated 3 years ago
- GeneDMRs is an R package to detect the differentially methylated regions based on genes, gene body, CpG islands and gene body interacted …☆10Nov 18, 2023Updated 2 years ago
- Run multiple Pipeline5 instances at once☆11Jun 6, 2025Updated 8 months ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Feb 16, 2020Updated 6 years ago
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Jun 16, 2021Updated 4 years ago
- Clonal structure identification through penalizing pairwise differences☆11Nov 25, 2025Updated 3 months ago
- ☆10Nov 25, 2025Updated 3 months ago
- Crossmapped phenotype ontologies for the oncology domain☆13Feb 16, 2026Updated 2 weeks ago
- ABSOLUTE source code that works with allelic copy ratio on both hg19 and hg38☆13Nov 5, 2025Updated 3 months ago
- ☆49Jan 4, 2023Updated 3 years ago
- Interpretable PROTAC degradation prediction with structure-informed deep ternary attention framework☆12Oct 6, 2025Updated 4 months ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Dec 6, 2023Updated 2 years ago
- ☆11Oct 15, 2023Updated 2 years ago
- Datasets for Drug Discovery and Development☆10Aug 22, 2020Updated 5 years ago
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆12Sep 15, 2023Updated 2 years ago
- ☆11Sep 1, 2023Updated 2 years ago