Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
☆176Dec 24, 2023Updated 2 years ago
Alternatives and similar repositories for alphafold_finetune
Users that are interested in alphafold_finetune are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- python tools for TCR:peptide-MHC modeling and analysis☆97Jun 26, 2026Updated 2 months ago
- ☆121Dec 7, 2022Updated 3 years ago
- Making Protein folding accessible to all!☆26Mar 22, 2026Updated 5 months ago
- An open-source platform for developing protein models beyond AlphaFold.☆422Jun 26, 2024Updated 2 years ago
- Public version for Distance-AF☆32Aug 17, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆179Apr 6, 2023Updated 3 years ago
- A collection of *fold* tools☆303Aug 8, 2025Updated last year
- ☆52Mar 30, 2026Updated 5 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆190Oct 7, 2025Updated 10 months ago
- Making Protein Design accessible to all via Google Colab!☆937Aug 28, 2026Updated last week
- In silico directed evolution of peptide binders with AlphaFold☆278Aug 27, 2026Updated last week
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆423Jul 3, 2023Updated 3 years ago
- Code for ColabDock paper☆157May 1, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆58Apr 15, 2026Updated 4 months ago
- predicting peptide-protein interactions☆141Dec 23, 2023Updated 2 years ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆176Sep 8, 2024Updated last year
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆425Feb 26, 2026Updated 6 months ago
- Open source code for AlphaFold.☆39May 6, 2026Updated 4 months ago
- Antigen-receptor Design Against Peptide-MHC Targets☆22Jan 9, 2026Updated 7 months ago
- ☆256May 22, 2023Updated 3 years ago
- Code for the ProteinMPNN paper☆1,841Aug 14, 2024Updated 2 years ago
- Fragment binding prediction with ColabFold☆45Updated this week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- List of papers about Proteins Design using Deep Learning☆1,975Aug 15, 2026Updated 3 weeks ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆102Jul 29, 2024Updated 2 years ago
- Modelling of Large Protein Complexes☆39Aug 8, 2025Updated last year
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆281Feb 14, 2024Updated 2 years ago
- Protein hallucination and inpainting with RoseTTAFold☆285Mar 30, 2023Updated 3 years ago
- EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein☆546Feb 19, 2025Updated last year
- ☆38Dec 21, 2023Updated 2 years ago
- OmegaFold Release Code☆626Dec 12, 2022Updated 3 years ago
- ☆41Jan 26, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆33Jun 1, 2024Updated 2 years ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆189Apr 21, 2024Updated 2 years ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆18Sep 10, 2024Updated last year
- ☆39Aug 28, 2023Updated 3 years ago
- ☆629Feb 6, 2025Updated last year
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆18Jul 9, 2024Updated 2 years ago
- Diffusion models of protein structure; trigonometry and attention are all you need!☆566Dec 12, 2023Updated 2 years ago