phbradley / alphafold_finetuneLinks
Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
☆164Updated last year
Alternatives and similar repositories for alphafold_finetune
Users that are interested in alphafold_finetune are comparing it to the libraries listed below
Sorting:
- Code for ColabDock paper☆148Updated 5 months ago
- Predict the structure of immune receptor proteins☆163Updated 9 months ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆120Updated 2 years ago
- Convenience Python APIs for antibody numbering using ANARCI☆106Updated 5 months ago
- Efficient evolution from protein language models☆217Updated 2 years ago
- In silico directed evolution of peptide binders with AlphaFold☆240Updated last week
- ☆114Updated last year
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆206Updated 5 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆198Updated 2 months ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 3 years ago
- Rifdock Library for Conformational Search☆162Updated last year
- open source code for Tencent tFold☆115Updated 7 months ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆165Updated 2 years ago
- ☆199Updated 6 months ago
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- ☆139Updated 3 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆163Updated 3 weeks ago
- Masif seed paper repository☆160Updated last month
- Fitness landscapes for antibodies☆89Updated last month
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆164Updated 6 months ago
- ☆127Updated 3 years ago
- Official repo of the modular BioExcel version of HADDOCK☆198Updated this week
- Protein folding in Pymol☆123Updated 2 weeks ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆146Updated 2 years ago
- AlphaBind code + model accompanying pre-print☆83Updated 3 months ago
- ☆70Updated 4 years ago
- AbLang: A language model for antibodies☆150Updated 2 years ago
- Improved antibody structure-based design using inverse folding☆140Updated 2 months ago
- ☆216Updated 2 months ago
- trRosetta for protein design☆183Updated 4 years ago