Alternatives and similar repositories for FlowCal:

Users that are interested in FlowCal are comparing it to the libraries listed below

• burtonrj / CytoPy
  A data-centric flow/mass cytometry automated analysis framework
  ☆38Updated last month
• scverse / pytometry
  Flow & mass cytometry analytics.
  ☆45Updated this week
• scverse / mudata
  Multimodal Data (.h5mu) implementation for Python
  ☆88Updated last week
• camlab-bioml / astir
  astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨
  ☆52Updated 9 months ago
• carpenter-singh-lab / 2022_Haghighi_NatureMethods
  High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
  ☆48Updated last month
• saezlab / omnipath
  Python client for the OmniPath web service
  ☆43Updated last week
• MaayanLab / blitzgsea
  Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …
  ☆43Updated 2 weeks ago
• lilab-bcb / harmony-pytorch
  ☆51Updated last year
• saezlab / corneto
  Unified knowledge-driven network inference from omics data
  ☆32Updated this week
• YeoLab / bento-tools
  A Python toolkit for subcellular analysis of spatial transcriptomics data
  ☆76Updated 2 weeks ago
• theislab / prophet
  ☆29Updated 2 weeks ago
• mousepixels / sanbomics
  bioinformatics plotting and tools
  ☆56Updated 9 months ago
• haniffalab / webatlas-pipeline
  A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas
  ☆55Updated last week
• saketkc / pySCTransform
  Python package to perform normalization and variance-stabilization of single-cell data
  ☆23Updated 2 years ago
• labsyspharm / scimap
  Spatial Single-Cell Analysis Toolkit
  ☆86Updated last month
• cytomining / pycytominer
  Python package for processing image-based profiling data
  ☆98Updated last week
• TaylorResearchLab / scedar
  Single-cell exploratory data analysis for RNA-Seq
  ☆40Updated 3 years ago
• cantinilab / Mowgli
  Single-cell multi-omics integration using Optimal Transport
  ☆42Updated 6 months ago
• Novartis / cellxgene-gateway
  Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cel…
  ☆60Updated last year
• MannLabs / scPortrait
  scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images
  ☆42Updated this week
• timyerg / venny4py
  ☆18Updated 6 months ago
• DendrouLab / panpipes
  Multi-modal single cell analysis pipelines
  ☆57Updated this week
• BIMSBbioinfo / flexynesis
  A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner
  ☆41Updated last week
• harryhaller001 / keggtools
  Library for KEGG pathway enrichment analysis
  ☆14Updated last week
• hubmapconsortium / spatial-transcriptomics-pipeline
  ☆29Updated 10 months ago
• bioFAM / mofapy2
  Multi-omics factor analysis v2
  ☆41Updated 4 months ago
• scverse / spatialdata-notebooks
  ☆45Updated this week
• theislab / spapros
  Python package for Probe set selection for targeted spatial transcriptomics.
  ☆33Updated 3 months ago
• rajewsky-lab / spacemake
  ☆41Updated last week
• BiomedicalMachineLearning / Spacell
  ☆25Updated 5 years ago