taborlab / FlowCal
Python Flow Cytometry Calibration Library
☆49Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for FlowCal
- A data-centric flow/mass cytometry automated analysis framework☆38Updated 2 years ago
- Flow & mass cytometry analytics.☆42Updated this week
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆47Updated last year
- A simple pythonic interface to biomart.☆55Updated 4 years ago
- ☆25Updated 3 months ago
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆50Updated 5 months ago
- Multimodal Data (.h5mu) implementation for Python☆78Updated last month
- FlowSOM algorithm in Python, using self-organizing maps and minimum spanning tree for visualization and interpretation of cytometry data☆29Updated 2 years ago
- A Python package for gene network analysis☆32Updated 2 years ago
- bioinformatics plotting and tools☆53Updated 5 months ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆21Updated this week
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆83Updated 2 years ago
- Python client for the OmniPath web service☆39Updated 5 months ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆77Updated 2 months ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆48Updated last year
- Single-cell exploratory data analysis for RNA-Seq☆39Updated 3 years ago
- CZ CELLxGENE Discover Census☆86Updated this week
- Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cel…☆56Updated 8 months ago
- Single-cell multi-omics integration using Optimal Transport☆38Updated 2 months ago
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆70Updated 2 weeks ago
- Code and documentation for the curation of cellxgene datasets☆38Updated this week
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆35Updated last year
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆17Updated 4 years ago
- CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology☆64Updated last year
- InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.☆56Updated this week
- A 3-Dimensional View of Human Metabolism and Disease☆25Updated 6 years ago
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆44Updated this week
- ☆21Updated 4 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆38Updated 3 weeks ago
- ☆48Updated 10 months ago