Alternatives and similar repositories for IntegratedLearner

Users that are interested in IntegratedLearner are comparing it to the libraries listed below

• sunshanwen / BP4RNAseq
  An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…
  ☆14Updated 3 years ago
• gregpoore / tcga_rebuttal
  Re-analysis of data provided by Gihawi et al. 2023 bioRxiv
  ☆26Updated 2 years ago
• JSB-UCLA / scReadSim
  A single cell sequencing read simulator.
  ☆33Updated 10 months ago
• abodein / timeOmics
  Time-Course Multi-Omics data integration
  ☆25Updated last year
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆39Updated 3 years ago
• gagneurlab / FRASER-analysis
  Accompanying analysis code for the FRASER manuscript
  ☆26Updated 5 years ago
• ed-lau / jcast
  Junction centric alternative splicing translator
  ☆20Updated 2 years ago
• gtonkinhill / TCGA_analysis
  ☆27Updated 2 years ago
• mritchielab / GlimmaV2
  interactive plots for differential expression analysis
  ☆34Updated 2 months ago
• 123xiaochen / VCFshiny
  ☆29Updated 10 months ago
• saezlab / MetaProViz
  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
  ☆16Updated this week
• mdozmorov / RNA-seq_notes
  A continually expanding collection of RNA-seq tools
  ☆51Updated 10 months ago
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated 2 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated this week
• jsalignon / cactus
  Chromatin ACcessibility and Transcriptomics Unifying Software
  ☆17Updated 10 months ago
• jtleek / svaseq
  Analysis for svaseq paper
  ☆19Updated 11 years ago
• andreasmock / MetaboDiff
  ☆31Updated 4 years ago
• datapplab / pathview
  pathway based data integration and visualization
  ☆41Updated 5 months ago
• TheJacksonLaboratory / JAXBD2K-ShortCourse
  This repository contains course materials from JAX-BD2K workshop.
  ☆32Updated 6 years ago
• Huber-group-EMBL / biomaRt
  R package providing query functionality to BioMart instances like Ensembl
  ☆43Updated this week
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆51Updated 6 months ago
• Kumquatum / GWENA
  Gene Co-expression Network analysis pipeline
  ☆25Updated 2 years ago
• gagneurlab / OUTRIDER
  OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data
  ☆53Updated last month
• cwieder / PathIntegrate
  PathIntegrate Python package for pathway-based multi-omics data integration
  ☆16Updated 9 months ago
• dzhakparov / GeneSelectR
  ☆19Updated last year
• Kingsford-Group / squid
  SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data
  ☆42Updated 3 years ago
• Simon-Coetzee / motifBreakR
  A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
  ☆29Updated last year
• astrazeneca-cgr-publications / JARVIS
  JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
  ☆23Updated 7 months ago
• collinwa / MCFA
  ☆20Updated last year
• dwgoon / nezzle
  Network Visualization using both GUI and Programming
  ☆29Updated 3 months ago