Integrated Machine Learning for Multi-omics Classification and Prediction
☆34Oct 19, 2026Updated 2 weeks ago
Alternatives and similar repositories for IntegratedLearner
Users that are interested in IntegratedLearner are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Differential analysis of multi-omics data based on the Tweedie distribution☆33Sep 28, 2026Updated last month
- Deconvolution of seed effects from gene effects in large scale RNAi screens☆13May 18, 2018Updated 8 years ago
- Workflows for comparative analyses of single-cell RNA sequencing data, migrated to the OSCA book.☆11May 15, 2019Updated 7 years ago
- 🐦 spideog - Command line utility for Kraken2 reports.☆11Nov 30, 2020Updated 5 years ago
- Build predicted cell-cell interaction networks from single-cell data.☆10Jan 31, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.☆13Jul 31, 2026Updated 3 months ago
- SummarizedBenchmark defines a flexible framework for benchmarking computational methods in R.☆17Aug 24, 2021Updated 5 years ago
- Feature Selection in scRNA-seq☆11Sep 9, 2021Updated 5 years ago
- NAnostring quality Control dasHbOard.☆11Updated this week
- Fast and Scalable Single Cell Differential Expression Analysis using Mixed-effects Models☆14Apr 8, 2026Updated 6 months ago
- R package for integrating and comparing multiple single cell genomic datasets☆12Dec 27, 2020Updated 5 years ago
- multi-resolution clustering of omics data☆15Apr 9, 2025Updated last year
- R implementation of integration metrics for single-cell data☆14Sep 23, 2026Updated last month
- GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens☆16Nov 29, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Chemical Similarity Enrichment analysis of metabolomics datasets☆32Jul 19, 2024Updated 2 years ago
- ☆12Mar 10, 2024Updated 2 years ago
- Common Factor Integration & Transfer learning (cFIT) for single cell RNA-seq data☆13Jul 6, 2021Updated 5 years ago
- Integrating zingeR with ZINB-WaVE weights☆27Feb 15, 2018Updated 8 years ago
- ☆23Feb 17, 2026Updated 8 months ago
- Deconvolve individual immune cell types from cancer data☆10Apr 29, 2017Updated 9 years ago
- This repository contains teaching material for the 3rd International Summer School on Non-Targeted Metabolomics Data Mining for Biomedica…☆12Aug 25, 2023Updated 3 years ago
- A quick, free tool for single-cell annotation using large language models☆13Nov 27, 2025Updated 11 months ago
- Course of Machine Learning for Biomedical Data -TECNUN University of Navarra☆12Apr 21, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code and Simulations using Bayesian Approximate Kernel Regression (BAKR)☆11Jan 31, 2019Updated 7 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 6 years ago
- scID☆14Oct 21, 2021Updated 5 years ago
- Assign taxonomy with blast, can be used for qiime☆26Mar 25, 2025Updated last year
- Code for performing PCA followed by CCA☆19Dec 2, 2018Updated 7 years ago
- Cell signatures, with confidence.☆10Jun 1, 2020Updated 6 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- ☆16Jul 9, 2024Updated 2 years ago
- Big data Regression for predicting DNase I hypersensitivity☆31Aug 27, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- causal TWAS (cTWAS)☆52Sep 2, 2026Updated 2 months ago
- Tools for metabolomic data☆42Oct 4, 2024Updated 2 years ago
- FunctionaL Omics Processing platform☆12Jul 25, 2024Updated 2 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆15May 2, 2019Updated 7 years ago
- code for Gogleva et al manuscript☆47Nov 30, 2022Updated 3 years ago
- AIDE: annotation-assisted isoform discovery and quantification from RNA-seq data☆16Aug 6, 2022Updated 4 years ago
- ATACseqQC tutorials for BioC 2019 workshop☆19Jul 28, 2020Updated 6 years ago