Integrated Machine Learning for Multi-omics Classification and Prediction
β29Jul 13, 2026Updated last week
Alternatives and similar repositories for IntegratedLearner
Users that are interested in IntegratedLearner are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π¦ spideog - Command line utility for Kraken2 reports.β11Nov 30, 2020Updated 5 years ago
- Differential analysis of multi-omics data based on the Tweedie distributionβ31May 7, 2026Updated 2 months ago
- multi-resolution clustering of omics dataβ14Apr 9, 2025Updated last year
- GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screensβ16Nov 29, 2022Updated 3 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasetsβ32Jul 19, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Bacterial Operon Finder for Functional Organizationβ15Nov 14, 2023Updated 2 years ago
- Build predicted cell-cell interaction networks from single-cell data.β10Jan 31, 2023Updated 3 years ago
- This repository contains teaching material for the 3rd International Summer School on Non-Targeted Metabolomics Data Mining for Biomedicaβ¦β12Aug 25, 2023Updated 2 years ago
- Assign taxonomy with blast, can be used for qiimeβ26Mar 25, 2025Updated last year
- Code and Simulations using Bayesian Approximate Kernel Regression (BAKR)β11Jan 31, 2019Updated 7 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016β12Mar 7, 2020Updated 6 years ago
- A single-cell RNAseq differential expression analysis approach in case-control studyβ10Mar 6, 2022Updated 4 years ago
- code for Gogleva et al manuscriptβ47Nov 30, 2022Updated 3 years ago
- causal TWAS (cTWAS)β51May 7, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ATACseqQC tutorials for BioC 2019 workshopβ19Jul 28, 2020Updated 5 years ago
- Nextflow pipeline wrapper for executing Cell Rangerβ13Mar 8, 2022Updated 4 years ago
- Design and implementation of FAIR Data Cubeβ11Jun 2, 2025Updated last year
- Code and simulations using biologically annotated neural networksβ23Aug 23, 2021Updated 4 years ago
- Code for producing the analysis in the "Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq" manuscrβ¦β16Feb 5, 2020Updated 6 years ago
- FunctionaL Omics Processing platformβ13Jul 25, 2024Updated last year
- This is the repo for CROssBARv2 Knowledge Graph data. CROssBARv2 is a heterogeneous general-purpose biomedical KG-based system.β15Jul 8, 2026Updated last week
- β17Dec 18, 2023Updated 2 years ago
- R package for integrating and comparing multiple single cell genomic datasetsβ12Dec 27, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperimentβ25Jul 2, 2025Updated last year
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosisβ21Feb 5, 2021Updated 5 years ago
- Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profilesβ44Mar 26, 2024Updated 2 years ago
- β11Mar 10, 2024Updated 2 years ago
- SuperCell for Cytometry dataβ13Oct 14, 2025Updated 9 months ago
- Resolving Species Level Classification Using Emuβ14Jun 14, 2024Updated 2 years ago
- Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.β13Jun 9, 2026Updated last month
- Repository for Fall 2019 incarnation of Bayesian Statistics at Carleton College.β12Mar 16, 2021Updated 5 years ago
- the toolbox for Microbial and personalized GEM, REactiobiome and community NEtwork modellingβ11Feb 3, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code examples for working with web based bioinformatics APIsβ10Feb 17, 2017Updated 9 years ago
- Common Factor Integration & Transfer learning (cFIT) for single cell RNA-seq dataβ13Jul 6, 2021Updated 5 years ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)β23Nov 11, 2024Updated last year
- R Package for Demographic Modelling Using Projection Matricesβ11Apr 8, 2025Updated last year
- A taxonomic classifier for shotgun metagenomics readsβ11Apr 4, 2025Updated last year
- nf-core/references is a bioinformatics pipeline that build references, for multiple use casesβ21Jul 6, 2026Updated 2 weeks ago
- INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation datasetβ¦β11Dec 12, 2022Updated 3 years ago